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joey711 / phyloseq

phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
http://joey711.github.io/phyloseq/
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Phyloseq error issue: print(plot_ordination(GP.ord_ITS, color = "Treatment", label = "Sample_ID", title = "ITS Combined") + geom_point(size = 3) + geom_text(size = 5, vjust = 1.5)) #Error message: Warning: Full functionality requires `physeq` be phyloseq-class with multiple components.Warning: Could not obtain coordinates from the provided `ordination`. #1726

Open cortez10arizona opened 4 months ago

cortez10arizona commented 4 months ago

It get this message constantly when using phyloseq

print(plot_ordination(GP.ord_ITS, color = "Treatment", label = "Sample_ID", title = "ITS Combined") + geom_point(size = 3) + geom_text(size = 5, vjust = 1.5))

Error message: Warning: Full functionality requires physeq be phyloseq-class with multiple components.Warning: Could not obtain coordinates from the provided ordination.