joey711 / phyloseq

phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
http://joey711.github.io/phyloseq/
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Normalize bar_plot with categories #729

Open dridk opened 7 years ago

dridk commented 7 years ago

I generate the following graph using this command :

   plot_bar(biomNorm, fill="Genus", x = "CATEGORIE")

rplot07

I would like to do a simple task : Display the plot in percentage instead raw value ? How Can I do that ? Changing raw data is cumberstome . I can't do it for each metadata.

slvrshot commented 7 years ago

Check this out: http://joey711.github.io/phyloseq-demo/Restroom-Biogeography.html