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joiningdata / lollipops

Lollipop-style mutation diagrams for annotating genetic variations.
GNU General Public License v3.0
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Direct Uniprot/SwissProt Accession - non-human genes #1

Closed ONeillMB1 closed 10 years ago

ONeillMB1 commented 10 years ago

Is there a way to use this for organisms other than humans - perhaps by directly entering the Uniprot/SwissProt accession?

pbnjay commented 10 years ago

Yup I can add that in easily. :)

Of course pfam has to have domain data for it so it can't be too obscure, but should work fine for other model species. On Sep 29, 2014 11:41 AM, "maryrood" notifications@github.com wrote:

Is there a way to use this for organisms other than humans - perhaps by directly entering the Uniprot/SwissProt accession?

— Reply to this email directly or view it on GitHub https://github.com/pbnjay/lollipops/issues/1.

ONeillMB1 commented 10 years ago

Fantastic, thank you!

Looking forward to using this.

pbnjay commented 10 years ago

There ya go @maryrood

ONeillMB1 commented 10 years ago

Thank you @pbnjay!

FYI The program seems to be working with one minor issue -> when the -U flag is used, the first variant change entered is not plotted (probably just an indexing error)

pbnjay commented 10 years ago

I shouldn't code when I'm tired... thanks for debugging with me =)