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joiningdata / lollipops

Lollipop-style mutation diagrams for annotating genetic variations.
GNU General Public License v3.0
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Timeout message #33

Closed TMosley closed 6 years ago

TMosley commented 6 years ago

I'm not sure exactly what is going on, but I'm not able to generate a plot. I keep getting this message:

Get http://pfam.xfam.org/protein/Q16829/graphic: dial tcp 193.62.192.83:80: i/o timeout

I've tried using both the Uniprot ID and HGNC gene name. Also I tried downloading the .json script from the pfam website, but I get this message:

json: cannot unmarshal array into Go value of type data.PfamGraphicResponse

And since I've never worked with json I have no idea what it means.

pbnjay commented 6 years ago

1st error basically says that you can't connect to pfam (either your internet or pfam's server isn't working right).

2nd message you can simply delete the outermost square brackets from the json file.