to-do list 2022-06-10 - Githubissues

chord diagram

[x] chordDiagram: Color gradients between groups #313
[ ] In circos.heatmap, support border.color as a vector #308
[ ] calc_gap() when it is not a two-group chord diagram #319
[ ] Visualize multiple group intersections (similar to a multi group Venn diagram) #296

[ ] support render circular heatmap as a raster image #279
[ ] Time consuming #278
[ ] in circular.heatmap(), support column clustering, show column names. Note columns are corresponded from most outside to inside.

[ ] posTrans should go to basic low-level graphics
[ ] overlap circos.labels() to other tracks
[x] optimize circos.labels() #357
[ ] shift text for neighbour sectors, e.g. in chord diagram, where there is a cluster of small sectors.

[x] Sector has radical offset #290
[ ] A real circular coordinate #295
[ ] add circos.labels #274, #255
[ ] add circos.initializeCircularGenome in the book #273
[ ] Comparison of 3 bacterial genomes #276
[ ] add a circos.phylo()
[x] add a circos.horizon()
[ ] add a circos.stackedText(): https://twitter.com/jokergoo_gu/status/1596081092154753024
[ ] add borders around text https://github.com/jokergoo/circlize/discussions/341
[x] moving the whole sector (including all tracks) away from the circle
[ ] Hierarchical edge bundling #354
[ ] combine two half circos plot (how to add links between them)?
[ ] units?