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jokergoo / rGREAT

GREAT Analysis - Functional Enrichment on Genomic Regions
https://jokergoo.github.io/rGREAT
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termID = "GO:0007165" for signal transduction is not working #17

Closed biobug16 closed 4 years ago

biobug16 commented 4 years ago

Hi I am using submitGreatJob(job, species = "hg19",version = "3.0.0") and tb = getEnrichmentTables(job, ontology = "GO Biological Process",termID = "GO:0007165")

but getting an error

Error in check_asso_file(f_term) : Empty data, probably your 'termID' is invalid.

And tried the same with other termID like tb = plotRegionGeneAssociationGraphs(job, ontology = "GO Biological Process",termID = "GO:0004984")

and getting the same error:

Error in check_asso_file(f_term) : Empty data, probably your 'termID' is invalid.

Can you please look into the matter and help?

jokergoo commented 4 years ago

Hi, maybe you can check https://github.com/jokergoo/rGREAT/issues/14#issuecomment-528997950