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jokergoo / simplifyEnrichment

Simplify functional enrichment results
https://jokergoo.github.io/simplifyEnrichment
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New feature request for simplifyGOFromMultipleLists #110

Open frylhc opened 5 days ago

frylhc commented 5 days ago

Hi jokergoo,

Thank you for developing such a great tool for tidying GO enrichment results — it has been incredibly helpful for my work! When using simplifyGOFromMultipleLists, I noticed that the left heatmap displays the adjusted p-values for each GO term across groups. However, in some cases, it might be more insightful to use NES values instead of p-values, as this would provide clearer information on the direction of gene expression changes. I was wondering if incorporating this feature might be considered in a future update of the package.

Thanks again for your amazing tool!

jokergoo commented 1 day ago

I think it is possible. simplifyGOFromMultipleLists() is a wrapper on simplifyGO() which actually allows to add more self-defined heatmaps.

It will be supported in the future. Thanks!