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jokergoo / simplifyEnrichment

Simplify functional enrichment results
https://jokergoo.github.io/simplifyEnrichment
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Custom font and background color for word cloud #37

Closed chiayic closed 3 years ago

chiayic commented 3 years ago

Hello, Really great and useful tool. Thanks a lot! I was trying to change the font color in the word cloud using word_cloud_grob_param

simplifyGO(mat,draw_word_cloud=T,
           word_cloud_grob_param=(col = 1))

Somehow it didn't work and still return the default random color without warning nor error message. I couldn't see which part went wrong. Your insight would be much appreciated.

Also, is it possible to change the background of the word cloud from the default grey scheme?

Thank you again, Chia-Yi

jokergoo commented 3 years ago

Sorry I didn't see your question! This is a new project and the new issues are easily be ignored by the massive issues from my other projects.

Currently, the support for the word cloud is limited in the simplifyGO() function, but I will support them in the future.

jokergoo commented 3 years ago
  1. the value for word_cloud_grob_param should be a list:
simplifyGO(mat,draw_word_cloud=T,
           word_cloud_grob_param=list(col = 1))  # add `list` here
  1. Now I have added bg_gp argument in the function so you can control the background colors as well as the border colors.
simplifyGO(mat, word_cloud_grob_param=list(col = "white"), bg_gp = gpar(fill = "orange", col = "blue", lty = 2))

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