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jokergoo / simplifyEnrichment

Simplify functional enrichment results
https://jokergoo.github.io/simplifyEnrichment
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Error when all cluster size are smaller than the cutoff #38

Closed jokergoo closed 3 years ago

jokergoo commented 3 years ago 
mat <-
structure(c(1, 0, 0, 0.5217739479608916, 0, 0, 0, 0, 0, 0, 0, 
0, 0, 0.72091597494382831, 0, 0, 0, 0, 1, 0.76570335255640232, 
0, 0.19353711912136234, 0.21294644506436483, 0, 0, 0.16069546596437889, 
0, 0, 0.83230159456882946, 0.15748467589661541, 0.17300013046049459, 
0.1861871274075077, 0.12117670640672897, 0.24422839314131162, 
0, 0.76570335255640232, 1, 0, 0.3777114713465542, 0.40896231651711284, 
0, 0, 0.13011810633393744, 0, 0, 0.68143764566685072, 0.13612980836976893, 
0.14756993670447638, 0.15583744547451689, 0.10101660024243997, 
0.19643920368897208, 0.5217739479608916, 0, 0, 1, 0, 0, 0, 0, 
0, 0, 0, 0, 0, 0.69958677444196415, 0, 0, 0, 0, 0.19353711912136234, 
0.3777114713465542, 0, 1, 0.91182904874626591, 0, 0, 0.12359424362384727, 
0, 0, 0.1732580248616688, 0.13119482715892314, 0.22863832856341884, 
0.10664459358133421, 0.096560221096157667, 0.18632537203128252, 
0, 0.21294644506436483, 0.40896231651711284, 0, 0.91182904874626591, 
1, 0, 0, 0.13514258254194136, 0, 0, 0.18865121958013387, 0.13983470217996308, 
0.24499816246339226, 0.11513387705942529, 0.10441067009299211, 
0.20424817672261916, 0, 0, 0, 0, 0, 0, 1, 0.99179154222261412, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.99179154222261412, 
1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.16069546596437889, 0.13011810633393744, 
0, 0.12359424362384727, 0.13514258254194136, 0, 0, 1, 0.97838497873844543, 
0, 0.92576303076271849, 0.10175492488458406, 0.1112163635236262, 
0.12477684185218538, 0.1133579858682664, 0.15345538772895337, 
0, 0, 0, 0, 0, 0, 0, 0, 0.97838497873844543, 1, 0, 0.92576303076271849, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0.61253207388984798, 
0, 0.75779956970872731, 0, 0, 0, 0.83230159456882946, 0.68143764566685072, 
0, 0.1732580248616688, 0.18865121958013387, 0, 0, 0.92576303076271849, 
0.92576303076271849, 0, 1, 0.14378982296845036, 0.15661428941369931, 
0.16650000873435172, 0.10808083685044109, 0.21279769711632793, 
0, 0.15748467589661541, 0.13612980836976893, 0, 0.13119482715892314, 
0.13983470217996308, 0, 0, 0.10175492488458406, 0, 0.61253207388984798, 
0.14378982296845036, 1, 0.12142366731492545, 0.83266743597444171, 
0.081221862137115172, 0.35854683390219166, 0.72091597494382831, 
0.17300013046049459, 0.14756993670447638, 0.69958677444196415, 
0.22863832856341884, 0.24499816246339226, 0, 0, 0.1112163635236262, 
0, 0, 0.15661428941369931, 0.12142366731492545, 1, 0.097300577088258483, 
0.087947807022519267, 0.16721483615362071, 0, 0.1861871274075077, 
0.15583744547451689, 0, 0.10664459358133421, 0.11513387705942529, 
0, 0, 0.12477684185218538, 0, 0.75779956970872731, 0.16650000873435172, 
0.83266743597444171, 0.097300577088258483, 1, 0.097372229747272457, 
0.44186968764236295, 0, 0.12117670640672897, 0.10101660024243997, 
0, 0.096560221096157667, 0.10441067009299211, 0, 0, 0.1133579858682664, 
0, 0, 0.10808083685044109, 0.081221862137115172, 0.087947807022519267, 
0.097372229747272457, 1, 0.11650843283670112, 0, 0.24422839314131162, 
0.19643920368897208, 0, 0.18632537203128252, 0.20424817672261916, 
0, 0, 0.15345538772895337, 0, 0, 0.21279769711632793, 0.35854683390219166, 
0.16721483615362071, 0.44186968764236295, 0.11650843283670112, 
1), .Dim = c(17L, 17L), .Dimnames = list(c("GO:1990904", "GO:0005739", 
"GO:0005759", "GO:1902494", "GO:0016607", "GO:0016604", "GO:0030055", 
"GO:0005925", "GO:0031967", "GO:0031975", "GO:0098805", "GO:0005740", 
"GO:0035577", "GO:0071013", "GO:0030667", "GO:0005840", "GO:0005794"
), c("GO:1990904", "GO:0005739", "GO:0005759", "GO:1902494", 
"GO:0016607", "GO:0016604", "GO:0030055", "GO:0005925", "GO:0031967", 
"GO:0031975", "GO:0098805", "GO:0005740", "GO:0035577", "GO:0071013", 
"GO:0030667", "GO:0005840", "GO:0005794")), measure = "Rel", ontology = "GO")