to-do list (mainly for text analysis)

jokergoo / simplifyEnrichment

Simplify functional enrichment results

https://jokergoo.github.io/simplifyEnrichment

Other

102 stars 15 forks source link

Open jokergoo opened 2 years ago

jokergoo commented 2 years ago

[ ] n-gram, (e.g. cell cycle)
[ ] words (or abbreviations) with two letters, or to distinguish abbreviations that are the same as normal words, but all in upper case.
[x] "enrichment" of words (using all gene descriptions/GO definitions as background, maybe more sources)
[ ] stemming of words

jokergoo commented 2 years ago

I prefer to construct a white word list for GO/gene descriptions that contain single words and phrases.