jokergoo / simplifyEnrichment

Simplify functional enrichment results
https://jokergoo.github.io/simplifyEnrichment
Other
108 stars 16 forks source link

Parallelize keyword enrichment #97

Open j-andrews7 opened 11 months ago

j-andrews7 commented 11 months ago

Given that the keyword enrichment process is by far the major bottleneck, it'd be very nice to be able to parallelize it via BiocParallel. It seems this would be a relatively straightforward addition here: https://github.com/jokergoo/simplifyEnrichment/blob/3d605478603020e365a5315ed794f5e85d7494bc/R/word_cloud.R#L526