jonassibbesen / hprc-rnaseq-analyses-scripts

Scripts used for the RNA-seq analyses in the HPRC draft pangenome paper.
MIT License
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Add mapping and simulation scripts #1

Closed jeizenga closed 2 years ago

jeizenga commented 2 years ago

I actually hadn't been keeping things in scripts, so I had to create these based on my logs. I think this should be enough to recreate any of the analyses I did, except maybe for some really fiddly bits with contig naming.