Add haploid and diploid path likelihood output

jonassibbesen / rpvg

Method for inferring path posterior probabilities and abundances from pangenome graph read alignments

MIT License

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Add haploid and diploid path likelihood output #1

Closed jonassibbesen closed 4 years ago

jonassibbesen commented 4 years ago

This PR adds the ability to calculate and output haploid and diploid path likelihoods. It can be activated using inference-model haplotypes. I am planning to add the same functionality for polyploids in a future PR.