This step can really slow down MMAPPR2 runs. Since there's usually only one peak chromosome, only one core handles it. It would be better for each peak chromosome, each core produces a part of the subsample Loess fit peaks. For example, for 4 cores, each one would produce the peak positions for 250 subsamples.
This step can really slow down MMAPPR2 runs. Since there's usually only one peak chromosome, only one core handles it. It would be better for each peak chromosome, each core produces a part of the subsample Loess fit peaks. For example, for 4 cores, each one would produce the peak positions for 250 subsamples.