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josefin-werme / LAVA

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Model does not converge #52

Closed karpat90 closed 1 year ago

karpat90 commented 1 year ago

Hello!

I am using UKBB data with 104 cases and 456244 controls for Phen1. The data doesn't have any genome-wide significant SNPs.

When I try running the analyses I get an error: Multiple logistic regression model for phenotype 'Phen1' in locus 1740 failed to converge (inversion error)

I have tried with another locus and I get the same error.

Could you help me with this?

Thank you!

ancolococky commented 1 year ago

So, how was this error solved? I am also tackling the same issue. In my case, the error occurred for some loci but not for other loci. I will really appreciate it if anyone could provide a solution. Thanks!