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josephdviviano / epitome

scriptit modules for fmri analysis
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T1 template wasn't copied into my epitome copy.. #35

Closed edickie closed 9 years ago

edickie commented 9 years ago

I ran into this error...

(there is no /home/edickie/epitome/ewd/assets/...)

josephdviviano commented 9 years ago

Hi Erin, why is 'ewd' in the path?

edickie commented 9 years ago

That the name i gave to the pipeline... On Nov 4, 2015 5:34 PM, "Joseph Viviano" notifications@github.com wrote:

Hi Erin, why is 'ewd' in the path?

— Reply to this email directly or view it on GitHub https://github.com/josephdviviano/epitome/issues/35#issuecomment-153891200 .

josephdviviano commented 9 years ago

Oh, I see, the new location for the T1 is in your home directory, and you tried to run this through the queue or on another machine...

josephdviviano commented 9 years ago

Nope I'm wrong, the source for epitome wasn't copying the assets folder. That's changed now, if you want to pull the latest commit (check the diff :) )

Aside: you might have more luck on our particular system if you make the epitome folder in your home folder a symlink to somewhere in your projects folder, so all the machines can see this code.

edickie commented 9 years ago

I was running it on the same machine...(but that will be an issue when I scale up and start using the queue..). It seems more like whatever is making a copy of epitome into my home folder isn't copying the assets... On Nov 4, 2015 9:11 PM, "Joseph Viviano" notifications@github.com wrote:

Oh, I see, the new location for the T1 is in your home directory, and you tried to run this through the queue or on another machine...

— Reply to this email directly or view it on GitHub https://github.com/josephdviviano/epitome/issues/35#issuecomment-153930896 .

josephdviviano commented 9 years ago

Yes check my last commit i fixed the bug (I wasn't copying the assets folder to the home directory).