josephdviviano / epitome

scriptit modules for fmri analysis
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Missing matlab library for physio #39

Closed josephdviviano closed 8 years ago

josephdviviano commented 8 years ago

on init_basic, when physio data is in the folder

* MODULE: init_basic. Reorients, phys regression, removes init TRs. * ++ 3dcalc: AFNI version=AFNI_2011_12_21_1014 (Dec 10 2014) [64-bit] ++ Authored by: A cast of thousands

++ VERSION CHECK! This program = AFNI_2011_12_21_1014 ++ Current AFNI website = AFNI_16.0.00

++ Output dataset /scratch/colin/epitome/tmsfmri_study1/P105/TMS/SESS01//anat_EPI_tmp_initTR.nii.gz

Setting up environment variables

LD_LIBRARY_PATH is .:/opt/quarantine/matlab/matlab_concurrent_all/MATLAB_R2013b/runtime/glnxa64:/opt/quarantine/matlab/matlab_concurrent_all/MATLAB_R2013b/bin/glnxa64:/opt/quarantine/matlab/matlab_concurrent_all/MATLAB_R2013b/sys/os/glnxa64:/opt/quarantine/matlab/matlab_concurrent_all/MATLAB_R2013b/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/opt/quarantine/matlab/matlab_concurrent_all/MATLAB_R2013b/sys/java/jre/glnxa64/jre/lib/amd64/server:/opt/quarantine/matlab/matlab_concurrent_all/MATLAB_R2013b/sys/java/jre/glnxa64/jre/lib/amd64/client:/opt/quarantine/matlab/matlab_concurrent_all/MATLAB_R2013b/sys/java/jre/glnxa64/jre/lib/amd64 /home/colin/epitome/tms_part1/bin/McRetroTS: error while loading shared libraries: libmwmclmcrrt.so.7.15: cannot open shared object file: No such file or directory

josephdviviano commented 8 years ago

Resolved by using the MCR installer from AFNI.