Closed joshuak94 closed 3 years ago
This is basically just so that users can call bamit index FILE and then bamit search -s chr1,100 -e chr2,100 /path/to/alignment/file/.
bamit index FILE
bamit search -s chr1,100 -e chr2,100 /path/to/alignment/file/
If in the search sub-parser, the index file is not found, it should be constructed and stored in the same directory.
Resolved by #18.
joshuak94
commented
3 years ago joshuak94
commented
3 years ago
This is basically just so that users can call
bamit index FILEand thenbamit search -s chr1,100 -e chr2,100 /path/to/alignment/file/.If in the search sub-parser, the index file is not found, it should be constructed and stored in the same directory.