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josiahseaman / skittle

DNASkittle is a web based genome browser that provides an interactive visualization of the raw sequence. Every nucleotide of 10Kbp can fit on one screen at a time. It makes heavy use of signal processing techniques to extract tandem repeats, and other genome elements.
GNU General Public License v2.0
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Fix Repeat Map Boxing Artifacts #154

Closed josiahseaman closed 11 years ago

josiahseaman commented 11 years ago

When the sample sequence starts with a series of N's it creates an artificially elevated correlation. The N's need to be removed from the calculation. Perhaps clipping the sequence until it has no leading N's would do it.

josiahseaman commented 11 years ago

Largely fixed in: ad891300ed96b6717714412ec037dca329730c68