Are there ready-to-use gapseq-rebuilt models?

jotech / gapseq

Informed prediction and analysis of bacterial metabolic pathways and genome-scale networks

GNU General Public License v3.0

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Are there ready-to-use gapseq-rebuilt models? #94

Closed JY-97 closed 2 years ago

JY-97 commented 2 years ago

I have tried to install and rebuild several examples by my self and the running time is too slow for a large batch rebuild. Are there any ready-to-use gapseq-rebuilt models I can download? Thank you!

jotech commented 2 years ago

hi @Ezio0o good point we will upload a larger collection of gapseq models in the following days!

JY-97 commented 2 years ago

Glad to hear that! Many thanks :)

Waschina commented 2 years ago

Hi! We uploaded gapseq models for all 5414 genomes from the Human Reference Gut Microbiome (HRGM) collection.

https://zenodo.org/record/5779237

Best wishes

JY-97 commented 2 years ago

Hi! We uploaded gapseq models for all 5414 genomes from the Human Reference Gut Microbiome (HRGM) collection.

zenodo.org/record/5779237

Best wishes

Thank you! Grateful for your kindly support!