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jpellman
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spmR
An implementation of Statistical Parametric Mapping written in R, specifically focusing on fMRI.
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Determine what data types (cell array or struct array) SPM.mat file uses for each of its fields
#44
jpellman
opened
9 years ago
0
Refactor variable names
#43
jpellman
opened
9 years ago
0
Make the SPM object from MATLAB into a true OOP object
#42
jpellman
opened
9 years ago
0
Determine which spm functions really should be ported and which are unnecessary to port.
#41
jpellman
opened
9 years ago
0
Add support for preprocessing
#40
jpellman
opened
9 years ago
0
Rewrite documentation in comments at the heads of functions to documentation that can be roxygenized.
#39
jpellman
opened
9 years ago
1
Translate to Esperanto
#38
jpellman
opened
9 years ago
1
spm_orth.R : OPT="pad" not used (no checking)
#37
jpellman
opened
9 years ago
0
spm_Volterra.R : Only one column assumed in U[[i]]$u
#36
jpellman
opened
9 years ago
0
spm_dctmtx.R : Testing needed
#35
jpellman
opened
9 years ago
0
spm_Ce.R : Test and correct code for when l is greater than 1.
#34
jpellman
opened
9 years ago
0
spm_fMRI_design.R : Test Xx and Xb
#33
jpellman
opened
9 years ago
0
spm_fMRI_design.R : Allow for 'rep' to be true
#32
jpellman
opened
9 years ago
0
spm_dx.R : Implement use of pseudoinverse if t > TOL
#31
jpellman
opened
9 years ago
0
spm_reml.R : Check if V is positive semi-definite
#30
jpellman
opened
9 years ago
0
spm_reml.R : Implement positive [semi]-definite check
#29
jpellman
opened
9 years ago
0
spm_FcUtil.R : Increment(?) c variable
#28
jpellman
opened
9 years ago
0
spm_FcUtil : Check to see if contrast is valid
#27
jpellman
opened
9 years ago
0
spm_resss.R : Image dimension, orientation and voxel size checks are unimplemented
#26
jpellman
opened
9 years ago
0
spm_global.R : It seems as though this was first implemented in R, then decision was changed.
#25
jpellman
opened
9 years ago
0
spm_SpUtil.R : Check to see if c0 and c1 are in X dual space
#24
jpellman
opened
9 years ago
1
spm_spm.R : Unrealistic assumption of only one Hparam/K per session
#23
jpellman
opened
9 years ago
0
spm_spm.R : Inaccuracy in the calcuation of Cy
#22
jpellman
opened
9 years ago
0
spm_spm.R : Requires an explicit mask handle
#21
jpellman
opened
9 years ago
0
spm_getSPM.R : Lots of commented out code
#20
jpellman
opened
9 years ago
0
spm_getSPM.R : Implement computation of mask and eliminated voxels
#19
jpellman
opened
9 years ago
0
spm_getSPM.R : Implement masking
#18
jpellman
opened
9 years ago
0
spm_getSPM.R : Implement conjunctions
#17
jpellman
opened
9 years ago
0
spm_P_RF : Check k and v values
#16
jpellman
opened
9 years ago
0
spm_conman.R : Implement checking the contrast line
#15
jpellman
opened
9 years ago
0
spm_conman.R : Implement right-padding of contrasts
#14
jpellman
opened
9 years ago
0
spm_conman.R : cstr will break the function if not a single vector/matrix; c must be a "proper matrix"
#13
jpellman
opened
9 years ago
0
spm_conman.R : Implement actions other than "ParseCon"
#12
jpellman
opened
9 years ago
0
spm_list.R : topoFDR is unimplemented
#11
jpellman
opened
9 years ago
0
spm_list.R : Implement conversion of cluster sizes from voxels to resels
#10
jpellman
opened
9 years ago
0
spmr.R : Delete old contrast entries in SPM?
#9
jpellman
opened
9 years ago
0
spmr.R : Implement Bayesian Estimation
#8
jpellman
opened
9 years ago
0
spmr.R : Implement setting up contrasts for factor designs
#7
jpellman
opened
9 years ago
0
spmr.R : Only maps files for the first session
#6
jpellman
opened
9 years ago
1
spmr.R : Implement conditional statement for case when 'mask' is null
#5
jpellman
opened
9 years ago
0
spmr.R : FIXME: nscans is function of number of files!
#4
jpellman
opened
9 years ago
0
spmr.R: TODO: multicondition/multiregression from file!
#3
jpellman
opened
9 years ago
0
Feature Request - Have spmR generate NIDM Metadata
#2
jpellman
opened
9 years ago
0
Try to converge with other R packages
#1
chrisgorgo
opened
9 years ago
1