Closed orifox closed 1 year ago
@orifox try this with space_phot==0.0.3 I think it should work now
Got farther. But it crashed. Not sure if it's something on my machine. Error below.
Trailer file written to: astrodrizzle.log
(16384, 8204)
889.1708190171985 1143.4852111466157 939 1193
Failed to create PSF model
---------------------------------------------------------------------------
OSError Traceback (most recent call last)
File ~/miniconda3/envs/17gax/lib/python3.9/site-packages/space_phot/util.py:477, in get_hst3_psf(st_obs, sky_location, psf_width)
474 level3_psf = photutils.psf.FittableImageModel(level3[mx,my],normalize=True,
475 oversampling=4)
--> 477 shutil.rmtree(outdir)
478 except:
File ~/miniconda3/envs/17gax/lib/python3.9/shutil.py:740, in rmtree(path, ignore_errors, onerror)
739 except OSError:
--> 740 onerror(os.rmdir, path, sys.exc_info())
741 else:
File ~/miniconda3/envs/17gax/lib/python3.9/shutil.py:738, in rmtree(path, ignore_errors, onerror)
737 fd_closed = True
--> 738 os.rmdir(path)
739 except OSError:
OSError: [Errno 39] Directory not empty: '/home/ofox/miniconda3/envs/17gax/lib/python3.9/site-packages/space_phot/temp_142'
During handling of the above exception, another exception occurred:
OSError Traceback (most recent call last)
Cell In[12], line 3
1 hst_flc_obs = space_phot.observation2(input_flcs)
2 hst_drz_obs = space_phot.observation3('my_ad/f555w_17gax_2023_jhat_drc.fits')
----> 3 psf_drz = space_phot.get_hst3_psf(hst_flc_obs,sn_location)#,num_psfs=4)
4 plt.imshow(psf_drz.data)
5 plt.show()
File ~/miniconda3/envs/17gax/lib/python3.9/site-packages/space_phot/util.py:480, in get_hst3_psf(st_obs, sky_location, psf_width)
478 except:
479 print('Failed to create PSF model')
--> 480 shutil.rmtree(outdir)
481 return level3_psf
File ~/miniconda3/envs/17gax/lib/python3.9/shutil.py:734, in rmtree(path, ignore_errors, onerror)
732 try:
733 if os.path.samestat(orig_st, os.fstat(fd)):
--> 734 _rmtree_safe_fd(fd, path, onerror)
735 try:
736 os.close(fd)
File ~/miniconda3/envs/17gax/lib/python3.9/shutil.py:690, in _rmtree_safe_fd(topfd, path, onerror)
688 os.unlink(entry.name, dir_fd=topfd)
689 except OSError:
--> 690 onerror(os.unlink, fullname, sys.exc_info())
File ~/miniconda3/envs/17gax/lib/python3.9/shutil.py:688, in _rmtree_safe_fd(topfd, path, onerror)
686 else:
687 try:
--> 688 os.unlink(entry.name, dir_fd=topfd)
689 except OSError:
690 onerror(os.unlink, fullname, sys.exc_info())
OSError: [Errno 16] Device or resource busy: '.nfs00000000aa7b758b00000061'
@orifox I can't reproduce this error so I think it is an issue with how you're running this, but I think I know the cause and will try to fix it
Ok, I switched over from my virtual to my local machine and it ran fine. I'm not sure what the issue is, but I can at least run it. I encountered another bug, but I'll open a new ticket for that. I consider this closed. Thank you!
I get the following error when running the notebook hst_uv.ipynb in /astro/armin/data/space_phot_debug/ori. All necessary data files should be accessible from the notebook.