Closed ghost closed 9 years ago
Hi.
I'm pretty new to genomics and using the command line, but I was wondering if this is an easy fix:
~/Documents/ddocent-master$ ls bars.names install_dDocent.FB_requirements README.md bars.names~ install_dDocent.GATK_requirements rename.for.dDocent dDocent.FB LICENSE Rename_for_dDocent.sh dDocent.GATK mergefq.pl
~/Documents/ddocent-master$ sh rename.for.dDocent bars.names rename.for.dDocent: 9: rename.for.dDocent: Syntax error: "(" unexpected (expecting "fi")
Can't seem to get barcode file to work - instructions followed exactly as on the blog. As far as I am aware I have the newest version of dDocent.
Also, are there sample data sets to available for dDocent?
Cheers,
~ jat101
The script requires that you have files that were demultiplexed via process_radtags from Stacks and also that files are gzip compressed. Tutorials and data sets will be posted in the next few days.
Hi.
I'm pretty new to genomics and using the command line, but I was wondering if this is an easy fix:
~/Documents/ddocent-master$ ls bars.names install_dDocent.FB_requirements README.md bars.names~ install_dDocent.GATK_requirements rename.for.dDocent dDocent.FB LICENSE Rename_for_dDocent.sh dDocent.GATK mergefq.pl
~/Documents/ddocent-master$ sh rename.for.dDocent bars.names rename.for.dDocent: 9: rename.for.dDocent: Syntax error: "(" unexpected (expecting "fi")
Can't seem to get barcode file to work - instructions followed exactly as on the blog. As far as I am aware I have the newest version of dDocent.
Also, are there sample data sets to available for dDocent?
Cheers,
~ jat101