Correcting an error with vcftools 0.1.15 which doesn't allow two outputs at once. That was an issue when running the script with $NEWCUTOFF==yes (sorry, previously I tested it only with $NEWCUTOFF==no).
Also, the new vcftools print run information to stderr (changed > /dev/null to 2> /dev/null).
Correcting an error with vcftools 0.1.15 which doesn't allow two outputs at once. That was an issue when running the script with $NEWCUTOFF==yes (sorry, previously I tested it only with $NEWCUTOFF==no).
Also, the new vcftools print run information to stderr (changed > /dev/null to 2> /dev/null).