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jpuritz / dDocent

a bash pipeline for RAD sequencing
ddocent.com
MIT License
52 stars 42 forks source link

Change order of bwa mem parameters #46

Closed TomaszSuchan closed 5 years ago

TomaszSuchan commented 5 years ago

The order required by bwa 0.7.17 is bwa mem [params] reference.fasta R1.fq.gz R2.fq.gz

jpuritz commented 5 years ago

Thanks!