IndexError in pseudoGenerate.py due to Incorrect BED file format

jradrion / TEFLoN

TEFLoN uses paired-end illumina sequence data to discover and genotype transposable elements present in your samples.

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IndexError in pseudoGenerate.py due to Incorrect BED file format #17

Open kathbarros opened 1 week ago

kathbarros commented 1 week ago

When running the TEFLoN pipeline, the script pseudoGenerate.py finds an IndexError because it expects a 6-column BED file, but it seems the input file does not consistently meet this format.