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jrkerns / pylinac

An image analysis library for medical physics
https://pylinac.readthedocs.io/en/latest/
MIT License
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Issue in FlatSym module #295

Closed alessandrochiappini closed 4 years ago

alessandrochiappini commented 4 years ago

Hello, after a flat install of pylinac with some additional modules when i use the demo of FlatSym, with this code:

from pylinac import FlatSym FlatSym.run_demo()

obtain:

_runfile('C:/Users/brainfarm/Desktop/untitled0.py', wdir='C:/Users/brainfarm/Desktop') Traceback (most recent call last):

File "C:\Users\brainfarm\Desktop\untitled0.py", line 10, in FlatSym.run_demo()

File "C:\WPy64\python-3.8.2.amd64\lib\site-packages\pylinac\flatsym.py", line 129, in run_demo fs.analyze(flatness_method='varian', symmetry_method='varian')

File "C:\WPy64\python-3.8.2.amd64\lib\site-packages\pylinac\flatsym.py", line 156, in analyze self.symmetry = self._calc_symmetry(symmetry_method, vert_position, horiz_position, vert_width, horiz_width)

File "C:\WPy64\python-3.8.2.amd64\lib\site-packages\pylinac\flatsym.py", line 233, in _calc_symmetry vert_profile = self._get_vert_profile(vert_position, vert_width)

File "C:\WPy64\python-3.8.2.amd64\lib\site-packages\pylinac\flatsym.py", line 215, in _get_vert_profile left_width = int(round(self.array.shape[1]vert_position - self.array.shape[1]vert_width/2))

AttributeError: 'FlatSym' object has no attribute 'array'_

Thank you very much

jrkerns commented 4 years ago

Ah, this was a dumb move on my part. I merged #200 into master but then didn't checkout 2.3.1 in order to make the bump to 2.3.2. Reverting to 2.3.0 or .1 should fix this for now. 2.4 is also due out soon and will contain this fix. Thanks

myaqoub commented 4 years ago

Hi, I'm running Python 3.7 within jupyter and having exactly the same problem. how to fix it please? Thank you!

AttributeError Traceback (most recent call last)

in ----> 1 my_img.analyze(flatness_method='varian', symmetry_method='varian', vert_position=0.5, horiz_position=0.5) C:\ProgramData\Anaconda3\lib\site-packages\pylinac\flatsym.py in analyze(self, flatness_method, symmetry_method, vert_position, horiz_position, vert_width, horiz_width) C:\ProgramData\Anaconda3\lib\site-packages\pylinac\flatsym.py in _calc_symmetry(self, method, vert_position, horiz_position, vert_width, horiz_width) C:\ProgramData\Anaconda3\lib\site-packages\pylinac\flatsym.py in _get_vert_profile(self, vert_position, vert_width) AttributeError: 'FlatSym' object has no attribute 'array'