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jsh58 / Genrich

Detecting sites of genomic enrichment
MIT License
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Peak summit #87

Closed wangxiangxiu closed 1 year ago

wangxiangxiu commented 2 years ago

Hello, I'm trying Genrich to call peaks for ATAC-seq data. When doing motif finding and peak annotation, the peak summit file is needed, so I'm wonder how may I get the peak summit information from Genrich result files? Thanks a lot.

jsh58 commented 2 years ago

Thanks for the question. I am unsure what "peak summit information" you need, but the format of all output files is described in detail here.