mukuact commented 7 years ago

catkin bを初めてやると，エラーが出て，もう一度catkin bをすると無事通る．

makeの順番とかでしょうか？

42 と似てるかもしれません．

2回catkin buildすれば良いので困ってはいないですが，報告です．

さらの環境を以下で作った

mkdir catkin_test
cd catkin_test/
mkdir src
cd src
wstool init
wstool set jsk_3rdparty git@github.com:jsk-ros-pkg/jsk_3rdparty.git --git
wstool update jsk_3rdparty
cd ../
rosdep update
rosdep install --from-paths src --ignore-src -r -n -y
catkin b -v libsiftfast

catkin b libsiftfast -v の結果 log.txt

2回め log2.txt

wkentaro commented 7 years ago

catkin-tools==0.4.X(merve-devel, link-devel)と0.3.Xの両方試しましたが、僕の環境では起こりませんね。あと、Travisも通っているので、環境が特殊になっているのかと思います。 (catkin-toolsがaptのじゃなかったりするかもしれません。僕の試した環境では0.4.4でした。)

catkin --version  # outputs 0.4.4

screen shot 2017-04-28 at 10 27 19

とりあえず治したければmerge-develを使うか、

# 0.4.X
catkin config --merge-devel

catkin-tools==0.3.Xを使えばいいかと思います。

sudo pip install 'catkin-tools==0.3.1'

k-okada commented 7 years ago

普通にcatkin 入れているけど、動いているとおもいます．環境は以下．

$ catkin --version
catkin_tools 0.4.4 (C) 2014-2017 Open Source Robotics Foundation
catkin_tools is released under the Apache License, Version 2.0 (http://www.apache.org/licenses/LICENSE-2.0)
---
Using Python 2.7.6 (default, Oct 26 2016, 20:30:19) [GCC 4.8.4]
$ aptitude show python-catkin-tools
Package: python-catkin-tools             
State: installed
Automatically installed: no
Version: 0.4.4-1
Priority: optional
Section: python
Maintainer: William Woodall <william@osrfoundation.org>
Architecture: all
Uncompressed Size: 885 k
Depends: python (>= 2.7), python (< 2.8), python:any (>= 2.7.1-0ubuntu2),
         python-catkin-pkg (>= 0.2.9), python-pkg-resources, python-yaml,
         python-osrf-pycommon, python-argparse, python-setuptools
Conflicts: python3-catkin-tools, python3-catkin-tools
Description: Command line tools for working with catkin.
 Provides command line tools for working with catkin.

とりあえず治したければmerge-develを使うか、 catkin-tools==0.3.Xを使えばいいかと思います。

普通にやって動くものが、普通にやって動かない時に、普通でない方法で動かそうとするのは陥りやすい罠ですね．

普通にやって普通に動くので、普通に戻す方向が正解です．

ということで、真面目にlogをみてみると、

エラーになっているのは

mv: cannot stat ‘/home/muku/catkin_test/devel/.private/libsiftfast/lib/siftfastpy.so’: No such file or directory

なので、python犯人説ですね．ということで、先頭からみていくと、

-- Found PythonInterp: /home/muku/.pyenv/shims/python (found version "2.7.6")
-- Using PYTHON_EXECUTABLE: /home/muku/.pyenv/shims/python

早速嫌な予感がしてきました．僕のログを見ると

$ grep python log.txt  | grep -- --
[catkin_tools_prebuild:cmake] -- Found PythonInterp: /usr/bin/python (found version "2.7.6")
[catkin_tools_prebuild:cmake] -- Using PYTHON_EXECUTABLE: /usr/bin/python
[libsiftfast:cmake] -- Found PythonInterp: /usr/bin/python (found version "2.7.6")
[libsiftfast:cmake] -- Using PYTHON_EXECUTABLE: /usr/bin/python
[libsiftfast:make] cd libsiftfast_svn && svn revert --recursive . && patch -p0 -f -E < /tmp/aaa/src/jsk_3rdparty/3rdparty/libsiftfast/patches/01.fix_python_binding.patch
[libsiftfast:make] --   python
[libsiftfast:make] -- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython2.7.so (found version "2.7.6") 
[libsiftfast:make] -- Found PythonInterp: /usr/bin/python (found version "2.7.6")

美しいですね．py.so が落ちているから、PythonLibsとかが怪しいね．で、@mukuact のものに戻ると、

-- Using Python nosetests: /usr/local/bin/nosetests-2.7

またか．

-- Found PythonInterp: /usr/bin/python (found version "2.7.6")
-- Using PYTHON_EXECUTABLE: /usr/bin/python
-- Using Debian Python package layout

あれ、これでいいんだっけ？pyenv使っているつもりがいつのまにかaptになっているよ．バージョン同じだけど、へんじゃない．

-- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython2.7.so (found version "2.7.6")
-- Found PythonInterp: /usr/bin/python (found version "2.7.6")

ここも、apt．その下をみていると、

-- Performing Test HAVE_ALL_PYTHON_HEADERS
-- Performing Test HAVE_ALL_PYTHON_HEADERS - Failed
-- failed to use boost python libraries, check if python-numpy is installed.

エラーが出ている．これで直ると思う． package.xmlをみると、

 <build_depend>python-numpy</build_depend>

となっているから、結局、アドバイスとしては、コンパイルするなら

rosdep install --from-path . --ignore-src

しましょう．でも、

sudo apt-get install ros-indigo-libsiftfast

で終わるんだから、これで良いと思う．

log.txt

wkentaro commented 7 years ago

なるほど、rosdepはしていたけど、pyenvが起動していたから、systemのnumpy libが見つからなかったということですね。

k-okada commented 7 years ago

rosdep したら、apt-get install 走るんじゃないかな．だとすると、かならず、system にnumpyがはいるはず．ということで、rosdepしていないに一票．

-- ◉ Kei Okada

2017-04-28 11:55 GMT+09:00 Kentaro Wada notifications@github.com:

なるほど、rosdepはしていたけど、pyenvが起動していたから、systemのnumpy libが見つからなかったということですね。

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wkentaro commented 7 years ago

pyenvは使っていないので推測ですが、仮想環境を作るとsystemのlibを見ないということもあるのではないかと思うんですよね。( @iory @yuyu2172 Do you know about this? ) ここで (https://github.com/jsk-ros-pkg/jsk_3rdparty/issues/93#issue-224027936) rosdepはしていると書いてるのと、そもそもpython-numpyが入っていないというのは中々ない環境かなと思うので。。 pyenvにこんなissueもありましたので関係あるかもしれません: https://github.com/pyenv/pyenv/issues/518

k-okada commented 7 years ago

rosdep install --from-paths src --ignore-src -r -n -y

見逃していました．なるほど、たしかに、

    check_cxx_source_runs("
    #include <Python.h>
    #include <boost/thread/thread.hpp>
    #include <boost/thread/mutex.hpp>
    #include <boost/thread/condition.hpp>
    #include <boost/shared_ptr.hpp>
    #define PY_ARRAY_UNIQUE_SYMBOL PyArrayHandle
    #include <boost/python.hpp>
    #include <pyconfig.h>
    #include <numpy/arrayobject.h>
    int main()
    {
      return 0;
    }"
    HAVE_ALL_PYTHON_HEADERS)

    if( HAVE_ALL_PYTHON_HEADERS )
      message(STATUS "python and boost-python found")
      include_directories(${PYTHON_INCLUDE_PATH} ${Boost_INCLUDE_DIRS})
      link_directories(${Boost_LIBRARY_DIRS})
      add_library(siftfastpy SHARED siftfastpy.cpp libsiftfast.cpp)
      # stdc++ has to be included before opengl libraries due to some ATI bug (h
ttp://wiki.fifengine.de/Segfault_in_cxa_allocate_exception#Workaround)
      target_link_libraries(siftfastpy ${STDC_LIBRARY} ${PYTHON_LIBRARIES} ${Boo
st_PYTHON_LIBRARY})

      set_target_properties(siftfastpy PROPERTIES PREFIX "")
      if( WIN32 )
        set_target_properties(siftfastpy PROPERTIES SUFFIX ".pyd")
      endif()
      set(BUILD_SIFTFASTPY 1)
      install(TARGETS siftfastpy DESTINATION lib PERMISSIONS
        OWNER_READ OWNER_WRITE OWNER_EXECUTE
        GROUP_READ GROUP_EXECUTE
        WORLD_READ WORLD_EXECUTE)
    else()
      message(STATUS "failed to use boost python libraries, check if python-numpy is installed.")
    endif()

なので、結構難しそうだ．

iory commented 6 years ago

遅くなりましたが、これはpipでインストールした場合とaptでインストールした時のpathが違うことで起こるのではないでしょうか？

numpyは pipだと

/usr/local/lib/python2.7/dist-packages/numpy/core/include/numpy/

aptだと

/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/

にインストールされています。

iory commented 6 years ago

151　にてnumpyのincludepathを追加するpatchを作成しました。

k-okada commented 6 years ago

apt-get ros-kinetic-libsiftfastしたら，python-numpyが入るべきでは？入らないなら入れるように．入っていれば，パスは必要ないのでは？

iory commented 6 years ago

apt-get ros-kinetic-libsiftfastしたら，python-numpyが入るべきでは？入らないなら入れるように．入っていれば，パスは必要ないのでは？

日本語の意味の確認ですが、pipでインストールする人が悪いという意味でしょうか？

k-okada commented 6 years ago

pipでインストールしていても，apt-get instal ros....libsiftfastしたらpython-numpyがはいるのでは？という意味です．

◉ Kei Okada

2018年8月28日(火) 23:09 iory notifications@github.com:

apt-get ros-kinetic-libsiftfastしたら，python-numpyが入るべきでは？入らないなら入れるように．入っていれば，パスは必要ないのでは？

日本語の意味の確認ですが、pipでインストールする人が悪いという意味でしょうか？

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iory commented 6 years ago

でもrosdepしてsystemのnumpyが入ってもbuildが通りませんでしたというのがこの上のほうの話ではなかったでしょうか？

k-okada commented 6 years ago

pipのnumpyにパスをとおそたから動きました、というのは違うのでは？ということですシステムのパスは存在するんだから、それを使って何かやる方法があるはず。というのと pipで動きますは、全てのpython/numpy のバージョンで動きます、ということだから収集つかなるはず

2018年8月28日(火) 23:17 iory notifications@github.com:

でもrosdepしてsystemのnumpyが入ってもbuildが通りませんでしたというのがこの上のほうの話ではなかったでしょうか？

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--

◉ Kei Okada

iory commented 6 years ago

そういう意味でしたか。

システムのパスは存在するんだから、それを使って何かやる方法があるはず。

ということなので、システムのパスでbuildする方法を探します。

kochigami commented 4 years ago

catkin b libsiftfast -vすると， failed to use boost python libraries, check if python-numpy is installed. mv: cannot stat '/home/pepper/catkin_ws/devel/.private/libsiftfast/lib/siftfastpy.so': No such file or directory が出ます． ubuntuをクリーンインストールしようかと思っているのですが，その前に他に試すことがありましたらご教示ください． pipでnumpyを入れたと思います．（明日確認します）コンパイル時のログを見るに，pyenvは使っていないと思います． ubuntu16.04です．コンパイル2回目以降もエラーが出ます．

python-numpyのインストール先（下の長いログ）しかし

pepper@pepper-thinkpad-t480s:/usr/lib/python2.7/dist-packages$ ls | grep numpy

は何も出力しない

pepper@pepper-thinkpad-t480s:~$ dpkg -L python-numpy
/.
/usr
/usr/lib
/usr/lib/python2.7
/usr/lib/python2.7/dist-packages
/usr/lib/python2.7/dist-packages/numpy-1.11.0.egg-info
/usr/lib/python2.7/dist-packages/numpy-1.11.0.egg-info/dependency_links.txt
/usr/lib/python2.7/dist-packages/numpy-1.11.0.egg-info/PKG-INFO
/usr/lib/python2.7/dist-packages/numpy-1.11.0.egg-info/top_level.txt
/usr/lib/python2.7/dist-packages/numpy
/usr/lib/python2.7/dist-packages/numpy/lib
/usr/lib/python2.7/dist-packages/numpy/lib/shape_base.py
/usr/lib/python2.7/dist-packages/numpy/lib/ufunclike.py
/usr/lib/python2.7/dist-packages/numpy/lib/arrayterator.py
/usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py
/usr/lib/python2.7/dist-packages/numpy/lib/stride_tricks.py
/usr/lib/python2.7/dist-packages/numpy/lib/_iotools.py
/usr/lib/python2.7/dist-packages/numpy/lib/info.py
/usr/lib/python2.7/dist-packages/numpy/lib/type_check.py
/usr/lib/python2.7/dist-packages/numpy/lib/recfunctions.py
/usr/lib/python2.7/dist-packages/numpy/lib/user_array.py
/usr/lib/python2.7/dist-packages/numpy/lib/utils.py
/usr/lib/python2.7/dist-packages/numpy/lib/setup.py
/usr/lib/python2.7/dist-packages/numpy/lib/scimath.py
/usr/lib/python2.7/dist-packages/numpy/lib/__init__.py
/usr/lib/python2.7/dist-packages/numpy/lib/npyio.py
/usr/lib/python2.7/dist-packages/numpy/lib/twodim_base.py
/usr/lib/python2.7/dist-packages/numpy/lib/arraypad.py
/usr/lib/python2.7/dist-packages/numpy/lib/polynomial.py
/usr/lib/python2.7/dist-packages/numpy/lib/function_base.py
/usr/lib/python2.7/dist-packages/numpy/lib/arraysetops.py
/usr/lib/python2.7/dist-packages/numpy/lib/_datasource.py
/usr/lib/python2.7/dist-packages/numpy/lib/format.py
/usr/lib/python2.7/dist-packages/numpy/lib/index_tricks.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_index_tricks.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_arrayterator.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_financial.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test__version.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_io.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test__datasource.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_stride_tricks.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_format.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_utils.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_shape_base.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/data
/usr/lib/python2.7/dist-packages/numpy/lib/tests/data/py3-objarr.npz
/usr/lib/python2.7/dist-packages/numpy/lib/tests/data/py2-objarr.npy
/usr/lib/python2.7/dist-packages/numpy/lib/tests/data/py2-objarr.npz
/usr/lib/python2.7/dist-packages/numpy/lib/tests/data/win64python2.npy
/usr/lib/python2.7/dist-packages/numpy/lib/tests/data/python3.npy
/usr/lib/python2.7/dist-packages/numpy/lib/tests/data/py3-objarr.npy
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_recfunctions.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_ufunclike.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_arraysetops.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_arraypad.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test__iotools.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_nanfunctions.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_type_check.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_packbits.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_polynomial.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_twodim_base.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_function_base.py
/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_regression.py
/usr/lib/python2.7/dist-packages/numpy/lib/financial.py
/usr/lib/python2.7/dist-packages/numpy/lib/_version.py
/usr/lib/python2.7/dist-packages/numpy/linalg
/usr/lib/python2.7/dist-packages/numpy/linalg/info.py
/usr/lib/python2.7/dist-packages/numpy/linalg/setup.py
/usr/lib/python2.7/dist-packages/numpy/linalg/__init__.py
/usr/lib/python2.7/dist-packages/numpy/linalg/linalg.py
/usr/lib/python2.7/dist-packages/numpy/linalg/_umath_linalg.x86_64-linux-gnu.so
/usr/lib/python2.7/dist-packages/numpy/linalg/lapack_lite.x86_64-linux-gnu.so
/usr/lib/python2.7/dist-packages/numpy/linalg/tests
/usr/lib/python2.7/dist-packages/numpy/linalg/tests/test_build.py
/usr/lib/python2.7/dist-packages/numpy/linalg/tests/test_deprecations.py
/usr/lib/python2.7/dist-packages/numpy/linalg/tests/test_linalg.py
/usr/lib/python2.7/dist-packages/numpy/linalg/tests/test_regression.py
/usr/lib/python2.7/dist-packages/numpy/compat
/usr/lib/python2.7/dist-packages/numpy/compat/_inspect.py
/usr/lib/python2.7/dist-packages/numpy/compat/py3k.py
/usr/lib/python2.7/dist-packages/numpy/compat/setup.py
/usr/lib/python2.7/dist-packages/numpy/compat/__init__.py
/usr/lib/python2.7/dist-packages/numpy/testing
/usr/lib/python2.7/dist-packages/numpy/testing/nosetester.py
/usr/lib/python2.7/dist-packages/numpy/testing/noseclasses.py
/usr/lib/python2.7/dist-packages/numpy/testing/decorators.py
/usr/lib/python2.7/dist-packages/numpy/testing/utils.py
/usr/lib/python2.7/dist-packages/numpy/testing/setup.py
/usr/lib/python2.7/dist-packages/numpy/testing/print_coercion_tables.py
/usr/lib/python2.7/dist-packages/numpy/testing/__init__.py
/usr/lib/python2.7/dist-packages/numpy/testing/tests
/usr/lib/python2.7/dist-packages/numpy/testing/tests/test_doctesting.py
/usr/lib/python2.7/dist-packages/numpy/testing/tests/test_utils.py
/usr/lib/python2.7/dist-packages/numpy/testing/tests/test_decorators.py
/usr/lib/python2.7/dist-packages/numpy/__config__.py
/usr/lib/python2.7/dist-packages/numpy/distutils
/usr/lib/python2.7/dist-packages/numpy/distutils/mingw
/usr/lib/python2.7/dist-packages/numpy/distutils/mingw/gfortran_vs2003_hack.c
/usr/lib/python2.7/dist-packages/numpy/distutils/pathccompiler.py
/usr/lib/python2.7/dist-packages/numpy/distutils/mingw32ccompiler.py
/usr/lib/python2.7/dist-packages/numpy/distutils/__version__.py
/usr/lib/python2.7/dist-packages/numpy/distutils/info.py
/usr/lib/python2.7/dist-packages/numpy/distutils/npy_pkg_config.py
/usr/lib/python2.7/dist-packages/numpy/distutils/conv_template.py
/usr/lib/python2.7/dist-packages/numpy/distutils/environment.py
/usr/lib/python2.7/dist-packages/numpy/distutils/__config__.py
/usr/lib/python2.7/dist-packages/numpy/distutils/lib2def.py
/usr/lib/python2.7/dist-packages/numpy/distutils/compat.py
/usr/lib/python2.7/dist-packages/numpy/distutils/setup.py
/usr/lib/python2.7/dist-packages/numpy/distutils/from_template.py
/usr/lib/python2.7/dist-packages/numpy/distutils/msvc9compiler.py
/usr/lib/python2.7/dist-packages/numpy/distutils/system_info.py
/usr/lib/python2.7/dist-packages/numpy/distutils/__init__.py
/usr/lib/python2.7/dist-packages/numpy/distutils/cpuinfo.py
/usr/lib/python2.7/dist-packages/numpy/distutils/command
/usr/lib/python2.7/dist-packages/numpy/distutils/command/build_src.py
/usr/lib/python2.7/dist-packages/numpy/distutils/command/config.py
/usr/lib/python2.7/dist-packages/numpy/distutils/command/install.py
/usr/lib/python2.7/dist-packages/numpy/distutils/command/config_compiler.py
/usr/lib/python2.7/dist-packages/numpy/distutils/command/egg_info.py
/usr/lib/python2.7/dist-packages/numpy/distutils/command/install_headers.py
/usr/lib/python2.7/dist-packages/numpy/distutils/command/build_py.py
/usr/lib/python2.7/dist-packages/numpy/distutils/command/install_clib.py
/usr/lib/python2.7/dist-packages/numpy/distutils/command/build_ext.py
/usr/lib/python2.7/dist-packages/numpy/distutils/command/autodist.py
/usr/lib/python2.7/dist-packages/numpy/distutils/command/install_data.py
/usr/lib/python2.7/dist-packages/numpy/distutils/command/__init__.py
/usr/lib/python2.7/dist-packages/numpy/distutils/command/bdist_rpm.py
/usr/lib/python2.7/dist-packages/numpy/distutils/command/build.py
/usr/lib/python2.7/dist-packages/numpy/distutils/command/build_clib.py
/usr/lib/python2.7/dist-packages/numpy/distutils/command/sdist.py
/usr/lib/python2.7/dist-packages/numpy/distutils/command/develop.py
/usr/lib/python2.7/dist-packages/numpy/distutils/command/build_scripts.py
/usr/lib/python2.7/dist-packages/numpy/distutils/log.py
/usr/lib/python2.7/dist-packages/numpy/distutils/ccompiler.py
/usr/lib/python2.7/dist-packages/numpy/distutils/msvccompiler.py
/usr/lib/python2.7/dist-packages/numpy/distutils/misc_util.py
/usr/lib/python2.7/dist-packages/numpy/distutils/line_endings.py
/usr/lib/python2.7/dist-packages/numpy/distutils/exec_command.py
/usr/lib/python2.7/dist-packages/numpy/distutils/extension.py
/usr/lib/python2.7/dist-packages/numpy/distutils/fcompiler
/usr/lib/python2.7/dist-packages/numpy/distutils/fcompiler/pathf95.py
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コンパイル時のログ

git clone https://github.com/jsk-ros-pkg/jsk_3rdparty.git
~/catkin_ws/以下で rosdep install -y -r --from-paths src --ignore-src

pepper@pepper-thinkpad-t480s:~/catkin_ws/src$ catkin b libsiftfast -v
==> Expanding alias 'b' from 'catkin b libsiftfast -v' to 'catkin build libsiftfast -v'
-----------------------------------------------------------
Profile:                     default
Extending:          [cached] /opt/ros/kinetic
Workspace:                   /home/pepper/catkin_ws
-----------------------------------------------------------
Build Space:        [exists] /home/pepper/catkin_ws/build
Devel Space:        [exists] /home/pepper/catkin_ws/devel
Install Space:      [unused] /home/pepper/catkin_ws/install
Log Space:          [exists] /home/pepper/catkin_ws/logs
Source Space:       [exists] /home/pepper/catkin_ws/src
DESTDIR:            [unused] None
-----------------------------------------------------------
Devel Space Layout:          linked
Install Space Layout:        None
-----------------------------------------------------------
Additional CMake Args:       None
Additional Make Args:        None
Additional catkin Make Args: None
Internal Make Job Server:    True
Cache Job Environments:      False
-----------------------------------------------------------
Whitelisted Packages:        None
Blacklisted Packages:        None
-----------------------------------------------------------
Workspace configuration appears valid.
-----------------------------------------------------------
[build] Found '124' packages in 0.0 seconds.                                   
[build] Package table is up to date.                                           
Starting  >>> libsiftfast                                                      
Starting   >> libsiftfast:loadenv                                              
Output     << libsiftfast:loadenv /home/pepper/catkin_ws/logs/libsiftfast/build.loadenv.020.log
Loading environment from: /home/pepper/catkin_ws/devel/env.sh
Finished   << libsiftfast:loadenv                                              
Starting   >> libsiftfast:mkdir                                                
Starting   >> libsiftfast:mkdir                                                
Starting   >> libsiftfast:cache-manifest                                       
Starting   >> libsiftfast:check                                                
Subprocess  > libsiftfast:check `cd /home/pepper/catkin_ws/build/libsiftfast; catkin build --get-env libsiftfast | catkin env -si  /usr/bin/make cmake_check_build_system; cd -`
Output     << libsiftfast:check /home/pepper/catkin_ws/logs/libsiftfast/build.check.017.log
/usr/bin/cmake -H/home/pepper/catkin_ws/src/jsk_3rdparty/3rdparty/libsiftfast -B/home/pepper/catkin_ws/build/libsiftfast --check-build-system CMakeFiles/Makefile.cmake 0
cd /home/pepper/catkin_ws/build/libsiftfast; catkin build --get-env libsiftfast | catkin env -si  /usr/bin/make cmake_check_build_system; cd -
Finished   << libsiftfast:check                                                
Starting   >> libsiftfast:make                                                 
Subprocess  > libsiftfast:make `cd /home/pepper/catkin_ws/build/libsiftfast; catkin build --get-env libsiftfast | catkin env -si  /usr/bin/make --jobserver-fds=6,7 -j; cd -`
_______________________________________________________________________________
Errors     << libsiftfast:make /home/pepper/catkin_ws/logs/libsiftfast/build.make.020.log
/usr/bin/cmake -H/home/pepper/catkin_ws/src/jsk_3rdparty/3rdparty/libsiftfast -B/home/pepper/catkin_ws/build/libsiftfast --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /home/pepper/catkin_ws/build/libsiftfast/CMakeFiles /home/pepper/catkin_ws/build/libsiftfast/CMakeFiles/progress.marks
/usr/bin/make -f CMakeFiles/Makefile2 all
make[1]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast'
/usr/bin/make -f CMakeFiles/libsiftfast.dir/build.make CMakeFiles/libsiftfast.dir/depend
make[2]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast'
cd /home/pepper/catkin_ws/build/libsiftfast && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pepper/catkin_ws/src/jsk_3rdparty/3rdparty/libsiftfast /home/pepper/catkin_ws/src/jsk_3rdparty/3rdparty/libsiftfast /home/pepper/catkin_ws/build/libsiftfast /home/pepper/catkin_ws/build/libsiftfast /home/pepper/catkin_ws/build/libsiftfast/CMakeFiles/libsiftfast.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast'
/usr/bin/make -f CMakeFiles/libsiftfast.dir/build.make CMakeFiles/libsiftfast.dir/build
make[2]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast'
[100%] Generating /home/pepper/catkin_ws/devel/.private/libsiftfast/lib/libsiftfast.so
make -f /home/pepper/catkin_ws/src/jsk_3rdparty/3rdparty/libsiftfast/Makefile SOURCE_DIR=/home/pepper/catkin_ws/src/jsk_3rdparty/3rdparty/libsiftfast INSTALL_DIR=/home/pepper/catkin_ws/devel/.private/libsiftfast PYTHON_INSTALL_DIR=lib/python2.7/dist-packages
make[3]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast'
make[3]: warning: jobserver unavailable: using -j1.  Add '+' to parent make rule.
cd libsiftfast_svn && svn up && mkdir -p build
Updating '.':
At revision 54.
cd libsiftfast_svn && svn revert --recursive . && for patch in /home/pepper/catkin_ws/src/jsk_3rdparty/3rdparty/libsiftfast/patches/*.patch; do patch -p0 -f -E < $patch; done
Reverted 'siftfastpy.cpp'
Reverted 'CMakeLists.txt'
patching file CMakeLists.txt
patching file CMakeLists.txt
patching file siftfastpy.cpp
cd libsiftfast_svn/build && BOOST_INCLUDEDIR= BOOST_LIBRARYDIR= cmake -DCMAKE_INSTALL_PREFIX=/home/pepper/catkin_ws/devel/.private/libsiftfast -DCMAKE_BUILD_TYPE=RelWithDebInfo .. && make  install
Re-run cmake no build system arguments
-- Using cmake version 3.5
-- Using SSE2 extensions
-- found boost version: 105800
-- installing to /home/pepper/catkin_ws/devel/.private/libsiftfast
-- failed to use boost python libraries, check if python-numpy is installed.
-- compiling with openmp support
-- MATLAB installation not found
-- Octave installation not found
-- Configuring done
-- Generating done
-- Build files have been written to: /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build
make[4]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'
/usr/bin/cmake -H/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn -B/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build/CMakeFiles /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[5]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'
make -f CMakeFiles/libsiftfast.dir/build.make CMakeFiles/libsiftfast.dir/depend
make[6]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'
cd /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build/CMakeFiles/libsiftfast.dir/DependInfo.cmake --color=
make[6]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'
make -f CMakeFiles/libsiftfast.dir/build.make CMakeFiles/libsiftfast.dir/build
make[6]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'
make[6]: Nothing to be done for 'CMakeFiles/libsiftfast.dir/build'.
make[6]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'
[ 28%] Built target libsiftfast
make -f CMakeFiles/libsiftfast-static.dir/build.make CMakeFiles/libsiftfast-static.dir/depend
make[6]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'
cd /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build/CMakeFiles/libsiftfast-static.dir/DependInfo.cmake --color=
make[6]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'
make -f CMakeFiles/libsiftfast-static.dir/build.make CMakeFiles/libsiftfast-static.dir/build
make[6]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'
make[6]: Nothing to be done for 'CMakeFiles/libsiftfast-static.dir/build'.
make[6]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'
[ 57%] Built target libsiftfast-static
make -f CMakeFiles/siftfast.dir/build.make CMakeFiles/siftfast.dir/depend
make[6]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'
cd /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build/CMakeFiles/siftfast.dir/DependInfo.cmake --color=
make[6]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'
make -f CMakeFiles/siftfast.dir/build.make CMakeFiles/siftfast.dir/build
make[6]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'
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make[6]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'
[100%] Built target siftfast
make[5]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'
/usr/bin/cmake -E cmake_progress_start /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build/CMakeFiles 0
make -f CMakeFiles/Makefile2 preinstall
make[5]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'
make[5]: Nothing to be done for 'preinstall'.
make[5]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "RelWithDebInfo"
-- Up-to-date: /home/pepper/catkin_ws/devel/.private/libsiftfast/include/siftfast/siftfast.h
-- Up-to-date: /home/pepper/catkin_ws/devel/.private/libsiftfast/bin/siftfast
-- Up-to-date: /home/pepper/catkin_ws/devel/.private/libsiftfast/lib/libsiftfast.so.1.3.0
-- Up-to-date: /home/pepper/catkin_ws/devel/.private/libsiftfast/lib/libsiftfast.so.1
-- Installing: /home/pepper/catkin_ws/devel/.private/libsiftfast/lib/libsiftfast.so
-- Up-to-date: /home/pepper/catkin_ws/devel/.private/libsiftfast/share/siftfast/examples/test1.jpg
-- Up-to-date: /home/pepper/catkin_ws/devel/.private/libsiftfast/share/siftfast/examples/test2.jpg
-- Up-to-date: /home/pepper/catkin_ws/devel/.private/libsiftfast/share/siftfast/examples/test0.jpg
-- Up-to-date: /home/pepper/catkin_ws/devel/.private/libsiftfast/share/siftfast/examples/testsiftfast.py
make[4]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'
mkdir -p /home/pepper/catkin_ws/devel/.private/libsiftfast/lib/python2.7/dist-packages && mv /home/pepper/catkin_ws/devel/.private/libsiftfast/lib/siftfastpy.so /home/pepper/catkin_ws/devel/.private/libsiftfast/lib/python2.7/dist-packages/siftfastpy.so
WARN, found multiple boost versions '[(1, 58, 0, '/usr', '/usr/include', True, True), (1, 58, 0, '/usr', '/usr/include', True, True)]', using latestWARN, found multiple boost versions '[(1, 58, 0, '/usr', '/usr/include', True, True), (1, 58, 0, '/usr', '/usr/include', True, True)]', using latestmv: cannot stat '/home/pepper/catkin_ws/devel/.private/libsiftfast/lib/siftfastpy.so': No such file or directory
/home/pepper/catkin_ws/src/jsk_3rdparty/3rdparty/libsiftfast/Makefile:29: recipe for target 'libsiftfast' failed
make[3]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast'
make[3]: *** [libsiftfast] Error 1
CMakeFiles/libsiftfast.dir/build.make:60: recipe for target '/home/pepper/catkin_ws/devel/.private/libsiftfast/lib/libsiftfast.so' failed
make[2]: *** [/home/pepper/catkin_ws/devel/.private/libsiftfast/lib/libsiftfast.so] Error 2
make[2]: *** Deleting file '/home/pepper/catkin_ws/devel/.private/libsiftfast/lib/libsiftfast.so'
make[2]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast'
CMakeFiles/Makefile2:259: recipe for target 'CMakeFiles/libsiftfast.dir/all' failed
make[1]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast'
make[1]: *** [CMakeFiles/libsiftfast.dir/all] Error 2
Makefile:138: recipe for target 'all' failed
make: *** [all] Error 2
cd /home/pepper/catkin_ws/build/libsiftfast; catkin build --get-env libsiftfast | catkin env -si  /usr/bin/make --jobserver-fds=6,7 -j; cd -
...............................................................................
Failed     << libsiftfast:make           [ Exited with code 2 ]                
Failed    <<< libsiftfast                [ 1.8 seconds ]                       
[build] Summary: 0 of 1 packages succeeded.                                    
[build]   Ignored:   123 packages were skipped or are blacklisted.             
[build]   Warnings:  None.                                                     
[build]   Abandoned: None.                                                     
[build]   Failed:    1 packages failed.                                        
[build] Runtime: 2.5 seconds total.

k-okada commented 4 years ago

クリーンインストールもpip install もやらないほうがいいとおもいますが、メッセージを見るに libboost-python-dev か何かがないかおかしいようにみえます。 catkin build libsiftfast -vi —make-args VERBOSE=1 したらもっとエラーメッセージが出るかと思います

2019年10月15日(火) 23:41 Kanae Kochigami notifications@github.com:

catkin b libsiftfast -vすると， failed to use boost python libraries, check if python-numpy is installed. mv: cannot stat '/home/pepper/catkin_ws/devel/.private/libsiftfast/lib/siftfastpy.so': No such file or directory が出ます． ubuntuをクリーンインストールしようかと思っているのですが，その前に他に試すことがありましたらご教示ください． pipでnumpyを入れたと思います．（明日確認します）コンパイル時のログを見るに，pyenvは使っていないと思います． ubuntu16.04です．コンパイル2回目以降もエラーが出ます．

python-numpyのインストール先（下の長いログ）しかし

pepper@pepper-thinkpad-t480s:/usr/lib/python2.7/dist-packages$ ls | grep numpy

は何も出力しない

pepper@pepper-thinkpad-t480s:~$ dpkg -L python-numpy

/.

/usr

/usr/lib

/usr/lib/python2.7

/usr/lib/python2.7/dist-packages

/usr/lib/python2.7/dist-packages/numpy-1.11.0.egg-info

/usr/lib/python2.7/dist-packages/numpy-1.11.0.egg-info/dependency_links.txt

/usr/lib/python2.7/dist-packages/numpy-1.11.0.egg-info/PKG-INFO

/usr/lib/python2.7/dist-packages/numpy-1.11.0.egg-info/top_level.txt

/usr/lib/python2.7/dist-packages/numpy

/usr/lib/python2.7/dist-packages/numpy/lib

/usr/lib/python2.7/dist-packages/numpy/lib/shape_base.py

/usr/lib/python2.7/dist-packages/numpy/lib/ufunclike.py

/usr/lib/python2.7/dist-packages/numpy/lib/arrayterator.py

/usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py

/usr/lib/python2.7/dist-packages/numpy/lib/stride_tricks.py

/usr/lib/python2.7/dist-packages/numpy/lib/_iotools.py

/usr/lib/python2.7/dist-packages/numpy/lib/info.py

/usr/lib/python2.7/dist-packages/numpy/lib/type_check.py

/usr/lib/python2.7/dist-packages/numpy/lib/recfunctions.py

/usr/lib/python2.7/dist-packages/numpy/lib/user_array.py

/usr/lib/python2.7/dist-packages/numpy/lib/utils.py

/usr/lib/python2.7/dist-packages/numpy/lib/setup.py

/usr/lib/python2.7/dist-packages/numpy/lib/scimath.py

/usr/lib/python2.7/dist-packages/numpy/lib/init.py

/usr/lib/python2.7/dist-packages/numpy/lib/npyio.py

/usr/lib/python2.7/dist-packages/numpy/lib/twodim_base.py

/usr/lib/python2.7/dist-packages/numpy/lib/arraypad.py

/usr/lib/python2.7/dist-packages/numpy/lib/polynomial.py

/usr/lib/python2.7/dist-packages/numpy/lib/function_base.py

/usr/lib/python2.7/dist-packages/numpy/lib/arraysetops.py

/usr/lib/python2.7/dist-packages/numpy/lib/_datasource.py

/usr/lib/python2.7/dist-packages/numpy/lib/format.py

/usr/lib/python2.7/dist-packages/numpy/lib/index_tricks.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_index_tricks.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_arrayterator.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_financial.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test__version.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_io.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test__datasource.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_stride_tricks.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_format.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_utils.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_shape_base.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/data

/usr/lib/python2.7/dist-packages/numpy/lib/tests/data/py3-objarr.npz

/usr/lib/python2.7/dist-packages/numpy/lib/tests/data/py2-objarr.npy

/usr/lib/python2.7/dist-packages/numpy/lib/tests/data/py2-objarr.npz

/usr/lib/python2.7/dist-packages/numpy/lib/tests/data/win64python2.npy

/usr/lib/python2.7/dist-packages/numpy/lib/tests/data/python3.npy

/usr/lib/python2.7/dist-packages/numpy/lib/tests/data/py3-objarr.npy

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_recfunctions.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_ufunclike.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_arraysetops.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_arraypad.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test__iotools.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_nanfunctions.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_type_check.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_packbits.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_polynomial.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_twodim_base.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_function_base.py

/usr/lib/python2.7/dist-packages/numpy/lib/tests/test_regression.py

/usr/lib/python2.7/dist-packages/numpy/lib/financial.py

/usr/lib/python2.7/dist-packages/numpy/lib/_version.py

/usr/lib/python2.7/dist-packages/numpy/linalg

/usr/lib/python2.7/dist-packages/numpy/linalg/info.py

/usr/lib/python2.7/dist-packages/numpy/linalg/setup.py

/usr/lib/python2.7/dist-packages/numpy/linalg/init.py

/usr/lib/python2.7/dist-packages/numpy/linalg/linalg.py

/usr/lib/python2.7/dist-packages/numpy/linalg/_umath_linalg.x86_64-linux-gnu.so

/usr/lib/python2.7/dist-packages/numpy/linalg/lapack_lite.x86_64-linux-gnu.so

/usr/lib/python2.7/dist-packages/numpy/linalg/tests

/usr/lib/python2.7/dist-packages/numpy/linalg/tests/test_build.py

/usr/lib/python2.7/dist-packages/numpy/linalg/tests/test_deprecations.py

/usr/lib/python2.7/dist-packages/numpy/linalg/tests/test_linalg.py

/usr/lib/python2.7/dist-packages/numpy/linalg/tests/test_regression.py

/usr/lib/python2.7/dist-packages/numpy/compat

/usr/lib/python2.7/dist-packages/numpy/compat/_inspect.py

/usr/lib/python2.7/dist-packages/numpy/compat/py3k.py

/usr/lib/python2.7/dist-packages/numpy/compat/setup.py

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/usr/lib/python2.7/dist-packages/numpy/testing

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/usr/lib/python2.7/dist-packages/numpy/testing/utils.py

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/usr/lib/python2.7/dist-packages/numpy/distutils/environment.py

/usr/lib/python2.7/dist-packages/numpy/distutils/config.py

/usr/lib/python2.7/dist-packages/numpy/distutils/lib2def.py

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/usr/lib/python2.7/dist-packages/numpy/distutils/from_template.py

/usr/lib/python2.7/dist-packages/numpy/distutils/msvc9compiler.py

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/usr/lib/python2.7/dist-packages/numpy/distutils/cpuinfo.py

/usr/lib/python2.7/dist-packages/numpy/distutils/command

/usr/lib/python2.7/dist-packages/numpy/distutils/command/build_src.py

/usr/lib/python2.7/dist-packages/numpy/distutils/command/config.py

/usr/lib/python2.7/dist-packages/numpy/distutils/command/install.py

/usr/lib/python2.7/dist-packages/numpy/distutils/command/config_compiler.py

/usr/lib/python2.7/dist-packages/numpy/distutils/command/egg_info.py

/usr/lib/python2.7/dist-packages/numpy/distutils/command/install_headers.py

/usr/lib/python2.7/dist-packages/numpy/distutils/command/build_py.py

/usr/lib/python2.7/dist-packages/numpy/distutils/command/install_clib.py

/usr/lib/python2.7/dist-packages/numpy/distutils/command/build_ext.py

/usr/lib/python2.7/dist-packages/numpy/distutils/command/autodist.py

/usr/lib/python2.7/dist-packages/numpy/distutils/command/install_data.py

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/usr/lib/python2.7/dist-packages/numpy/distutils/command/develop.py

/usr/lib/python2.7/dist-packages/numpy/distutils/command/build_scripts.py

/usr/lib/python2.7/dist-packages/numpy/distutils/log.py

/usr/lib/python2.7/dist-packages/numpy/distutils/ccompiler.py

/usr/lib/python2.7/dist-packages/numpy/distutils/msvccompiler.py

/usr/lib/python2.7/dist-packages/numpy/distutils/misc_util.py

/usr/lib/python2.7/dist-packages/numpy/distutils/line_endings.py

/usr/lib/python2.7/dist-packages/numpy/distutils/exec_command.py

/usr/lib/python2.7/dist-packages/numpy/distutils/extension.py

/usr/lib/python2.7/dist-packages/numpy/distutils/fcompiler

/usr/lib/python2.7/dist-packages/numpy/distutils/fcompiler/pathf95.py

/usr/lib/python2.7/dist-packages/numpy/distutils/fcompiler/pg.py

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/usr/lib/python2.7/dist-packages/numpy/distutils/fcompiler/mips.py

/usr/lib/python2.7/dist-packages/numpy/distutils/fcompiler/nag.py

/usr/lib/python2.7/dist-packages/numpy/distutils/fcompiler/compaq.py

/usr/lib/python2.7/dist-packages/numpy/distutils/fcompiler/lahey.py

/usr/lib/python2.7/dist-packages/numpy/distutils/fcompiler/hpux.py

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コンパイル時のログ

git clone https://github.com/jsk-ros-pkg/jsk_3rdparty.git

~/catkin_ws/以下で rosdep install -y -r --from-paths src --ignore-src

pepper@pepper-thinkpad-t480s:~/catkin_ws/src$ catkin b libsiftfast -v

==> Expanding alias 'b' from 'catkin b libsiftfast -v' to 'catkin build libsiftfast -v'

Profile: default

Extending: [cached] /opt/ros/kinetic

Workspace: /home/pepper/catkin_ws

Build Space: [exists] /home/pepper/catkin_ws/build

Devel Space: [exists] /home/pepper/catkin_ws/devel

Install Space: [unused] /home/pepper/catkin_ws/install

Log Space: [exists] /home/pepper/catkin_ws/logs

Source Space: [exists] /home/pepper/catkin_ws/src

DESTDIR: [unused] None

Devel Space Layout: linked

Install Space Layout: None

Additional CMake Args: None

Additional Make Args: None

Additional catkin Make Args: None

Internal Make Job Server: True

Cache Job Environments: False

Whitelisted Packages: None

Blacklisted Packages: None

Workspace configuration appears valid.

[build] Found '124' packages in 0.0 seconds.

[build] Package table is up to date.

Starting >>> libsiftfast

Starting >> libsiftfast:loadenv

Output << libsiftfast:loadenv /home/pepper/catkin_ws/logs/libsiftfast/build.loadenv.020.log

Loading environment from: /home/pepper/catkin_ws/devel/env.sh

Finished << libsiftfast:loadenv

Starting >> libsiftfast:mkdir

Starting >> libsiftfast:mkdir

Starting >> libsiftfast:cache-manifest

Starting >> libsiftfast:check

Subprocess > libsiftfast:check cd /home/pepper/catkin_ws/build/libsiftfast; catkin build --get-env libsiftfast | catkin env -si /usr/bin/make cmake_check_build_system; cd -

Output << libsiftfast:check /home/pepper/catkin_ws/logs/libsiftfast/build.check.017.log

/usr/bin/cmake -H/home/pepper/catkin_ws/src/jsk_3rdparty/3rdparty/libsiftfast -B/home/pepper/catkin_ws/build/libsiftfast --check-build-system CMakeFiles/Makefile.cmake 0

cd /home/pepper/catkin_ws/build/libsiftfast; catkin build --get-env libsiftfast | catkin env -si /usr/bin/make cmake_check_build_system; cd -

Finished << libsiftfast:check

Starting >> libsiftfast:make

Subprocess > libsiftfast:make cd /home/pepper/catkin_ws/build/libsiftfast; catkin build --get-env libsiftfast | catkin env -si /usr/bin/make --jobserver-fds=6,7 -j; cd -

Errors << libsiftfast:make /home/pepper/catkin_ws/logs/libsiftfast/build.make.020.log

/usr/bin/cmake -H/home/pepper/catkin_ws/src/jsk_3rdparty/3rdparty/libsiftfast -B/home/pepper/catkin_ws/build/libsiftfast --check-build-system CMakeFiles/Makefile.cmake 0

/usr/bin/cmake -E cmake_progress_start /home/pepper/catkin_ws/build/libsiftfast/CMakeFiles /home/pepper/catkin_ws/build/libsiftfast/CMakeFiles/progress.marks

/usr/bin/make -f CMakeFiles/Makefile2 all

make[1]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast'

/usr/bin/make -f CMakeFiles/libsiftfast.dir/build.make CMakeFiles/libsiftfast.dir/depend

make[2]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast'

cd /home/pepper/catkin_ws/build/libsiftfast && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pepper/catkin_ws/src/jsk_3rdparty/3rdparty/libsiftfast /home/pepper/catkin_ws/src/jsk_3rdparty/3rdparty/libsiftfast /home/pepper/catkin_ws/build/libsiftfast /home/pepper/catkin_ws/build/libsiftfast /home/pepper/catkin_ws/build/libsiftfast/CMakeFiles/libsiftfast.dir/DependInfo.cmake --color=

make[2]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast'

/usr/bin/make -f CMakeFiles/libsiftfast.dir/build.make CMakeFiles/libsiftfast.dir/build

make[2]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast'

[100%] Generating /home/pepper/catkin_ws/devel/.private/libsiftfast/lib/libsiftfast.so

make -f /home/pepper/catkin_ws/src/jsk_3rdparty/3rdparty/libsiftfast/Makefile SOURCE_DIR=/home/pepper/catkin_ws/src/jsk_3rdparty/3rdparty/libsiftfast INSTALL_DIR=/home/pepper/catkin_ws/devel/.private/libsiftfast PYTHON_INSTALL_DIR=lib/python2.7/dist-packages

make[3]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast'

make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.

cd libsiftfast_svn && svn up && mkdir -p build

Updating '.':

At revision 54.

cd libsiftfast_svn && svn revert --recursive . && for patch in /home/pepper/catkin_ws/src/jsk_3rdparty/3rdparty/libsiftfast/patches/*.patch; do patch -p0 -f -E < $patch; done

Reverted 'siftfastpy.cpp'

Reverted 'CMakeLists.txt'

patching file CMakeLists.txt

patching file CMakeLists.txt

patching file siftfastpy.cpp

cd libsiftfast_svn/build && BOOST_INCLUDEDIR= BOOST_LIBRARYDIR= cmake -DCMAKE_INSTALL_PREFIX=/home/pepper/catkin_ws/devel/.private/libsiftfast -DCMAKE_BUILD_TYPE=RelWithDebInfo .. && make install

Re-run cmake no build system arguments

-- Using cmake version 3.5

-- Using SSE2 extensions

-- found boost version: 105800

-- installing to /home/pepper/catkin_ws/devel/.private/libsiftfast

-- failed to use boost python libraries, check if python-numpy is installed.

-- compiling with openmp support

-- MATLAB installation not found

-- Octave installation not found

-- Configuring done

-- Generating done

-- Build files have been written to: /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build

make[4]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'

/usr/bin/cmake -H/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn -B/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build --check-build-system CMakeFiles/Makefile.cmake 0

/usr/bin/cmake -E cmake_progress_start /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build/CMakeFiles /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build/CMakeFiles/progress.marks

make -f CMakeFiles/Makefile2 all

make[5]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'

make -f CMakeFiles/libsiftfast.dir/build.make CMakeFiles/libsiftfast.dir/depend

make[6]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'

cd /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build/CMakeFiles/libsiftfast.dir/DependInfo.cmake --color=

make[6]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'

make -f CMakeFiles/libsiftfast.dir/build.make CMakeFiles/libsiftfast.dir/build

make[6]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'

make[6]: Nothing to be done for 'CMakeFiles/libsiftfast.dir/build'.

make[6]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'

[ 28%] Built target libsiftfast

make -f CMakeFiles/libsiftfast-static.dir/build.make CMakeFiles/libsiftfast-static.dir/depend

make[6]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'

cd /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build/CMakeFiles/libsiftfast-static.dir/DependInfo.cmake --color=

make[6]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'

make -f CMakeFiles/libsiftfast-static.dir/build.make CMakeFiles/libsiftfast-static.dir/build

make[6]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'

make[6]: Nothing to be done for 'CMakeFiles/libsiftfast-static.dir/build'.

make[6]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'

[ 57%] Built target libsiftfast-static

make -f CMakeFiles/siftfast.dir/build.make CMakeFiles/siftfast.dir/depend

make[6]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'

cd /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build/CMakeFiles/siftfast.dir/DependInfo.cmake --color=

make[6]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'

make -f CMakeFiles/siftfast.dir/build.make CMakeFiles/siftfast.dir/build

make[6]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'

make[6]: Nothing to be done for 'CMakeFiles/siftfast.dir/build'.

make[6]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'

[100%] Built target siftfast

make[5]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'

/usr/bin/cmake -E cmake_progress_start /home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build/CMakeFiles 0

make -f CMakeFiles/Makefile2 preinstall

make[5]: Entering directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'

make[5]: Nothing to be done for 'preinstall'.

make[5]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'

Install the project...

/usr/bin/cmake -P cmake_install.cmake

-- Install configuration: "RelWithDebInfo"

-- Up-to-date: /home/pepper/catkin_ws/devel/.private/libsiftfast/include/siftfast/siftfast.h

-- Up-to-date: /home/pepper/catkin_ws/devel/.private/libsiftfast/bin/siftfast

-- Up-to-date: /home/pepper/catkin_ws/devel/.private/libsiftfast/lib/libsiftfast.so.1.3.0

-- Up-to-date: /home/pepper/catkin_ws/devel/.private/libsiftfast/lib/libsiftfast.so.1

-- Installing: /home/pepper/catkin_ws/devel/.private/libsiftfast/lib/libsiftfast.so

-- Up-to-date: /home/pepper/catkin_ws/devel/.private/libsiftfast/share/siftfast/examples/test1.jpg

-- Up-to-date: /home/pepper/catkin_ws/devel/.private/libsiftfast/share/siftfast/examples/test2.jpg

-- Up-to-date: /home/pepper/catkin_ws/devel/.private/libsiftfast/share/siftfast/examples/test0.jpg

-- Up-to-date: /home/pepper/catkin_ws/devel/.private/libsiftfast/share/siftfast/examples/testsiftfast.py

make[4]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast/libsiftfast_svn/build'

mkdir -p /home/pepper/catkin_ws/devel/.private/libsiftfast/lib/python2.7/dist-packages && mv /home/pepper/catkin_ws/devel/.private/libsiftfast/lib/siftfastpy.so /home/pepper/catkin_ws/devel/.private/libsiftfast/lib/python2.7/dist-packages/siftfastpy.so

WARN, found multiple boost versions '[(1, 58, 0, '/usr', '/usr/include', True, True), (1, 58, 0, '/usr', '/usr/include', True, True)]', using latestWARN, found multiple boost versions '[(1, 58, 0, '/usr', '/usr/include', True, True), (1, 58, 0, '/usr', '/usr/include', True, True)]', using latestmv: cannot stat '/home/pepper/catkin_ws/devel/.private/libsiftfast/lib/siftfastpy.so': No such file or directory

/home/pepper/catkin_ws/src/jsk_3rdparty/3rdparty/libsiftfast/Makefile:29: recipe for target 'libsiftfast' failed

make[3]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast'

make[3]: *** [libsiftfast] Error 1

CMakeFiles/libsiftfast.dir/build.make:60: recipe for target '/home/pepper/catkin_ws/devel/.private/libsiftfast/lib/libsiftfast.so' failed

make[2]: *** [/home/pepper/catkin_ws/devel/.private/libsiftfast/lib/libsiftfast.so] Error 2

make[2]: *** Deleting file '/home/pepper/catkin_ws/devel/.private/libsiftfast/lib/libsiftfast.so'

make[2]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast'

CMakeFiles/Makefile2:259: recipe for target 'CMakeFiles/libsiftfast.dir/all' failed

make[1]: Leaving directory '/home/pepper/catkin_ws/build/libsiftfast'

make[1]: *** [CMakeFiles/libsiftfast.dir/all] Error 2

Makefile:138: recipe for target 'all' failed

make: *** [all] Error 2

cd /home/pepper/catkin_ws/build/libsiftfast; catkin build --get-env libsiftfast | catkin env -si /usr/bin/make --jobserver-fds=6,7 -j; cd -

...............................................................................

Failed << libsiftfast:make [ Exited with code 2 ]

Failed <<< libsiftfast [ 1.8 seconds ]

[build] Summary: 0 of 1 packages succeeded.

[build] Ignored: 123 packages were skipped or are blacklisted.

[build] Warnings: None.

[build] Abandoned: None.

[build] Failed: 1 packages failed.

[build] Runtime: 2.5 seconds total.

— You are receiving this because you modified the open/close state. Reply to this email directly, view it on GitHub https://github.com/jsk-ros-pkg/jsk_3rdparty/issues/93?email_source=notifications&email_token=AADYNXGJILHDE22QYADC5HDQOXJBFA5CNFSM4DI4DD5KYY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOEBJASUY#issuecomment-542247251, or unsubscribe https://github.com/notifications/unsubscribe-auth/AADYNXEXATMYZS7TTL3UT2LQOXJBFANCNFSM4DI4DD5A .

--

◉ Kei Okada

jsk-ros-pkg / jsk_3rdparty

libsiftfast が1回目にビルドエラー #93

42 と似てるかもしれません．

151　にてnumpyのincludepathを追加するpatchを作成しました。

pipでインストールしていても，apt-get instal ros....libsiftfastしたらpython-numpyがはいるのでは？という意味です．

--

--

jsk-ros-pkg / jsk_3rdparty

libsiftfast が1回目にビルドエラー #93

42 と似てるかもしれません．

151 にてnumpyのincludepathを追加するpatchを作成しました。

pipでインストールしていても，apt-get instal ros....libsiftfastしたらpython-numpyがはいるのでは？という意味です．

--

--

151　にてnumpyのincludepathを追加するpatchを作成しました。