Features for next release

[x] Add explicit section testing the performance of the model on diverse data
[x] EnciclopeDIA spectral library support
[x] backend migration to ms2ml
- [x] remove constants
- [x] transition annotation logic
- [x] transition parsing
- [ ] transition dataset evaluation logic
[x] Disable ascore filtering and move ascore calculation to ms2ml
- [x] Disable ascore filtering
- [ ] Implement ascore in ms2ml
[x] implement tensor -> spec and tensors -> peptides in ms2ml
[x] Fix documentation ... having the delayed annotation in mkdocstrings makes it so it does not render the actual help
[x] move notebooks to quarto (also use quarto to make cli docs)

jspaezp / elfragmentador