jspunda / prostatex

This is the repository of the final project for the course Intelligent Systems in Medical Imaging 2017
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find out how to make lesion images isotropic #47

Open liuzrcc opened 7 years ago

liuzrcc commented 7 years ago

The T2TRA images have different mm/pixel. To train a network this mm/pixel value has to be the same for all the input images. Additionally, when we can change the mm/pixel values we can use this to combine the lesion images of different scan types (e.g. ADC, t2_tra)

schelv commented 7 years ago

what I found so far

schelv commented 7 years ago

We can also look at how they resampled the images in the papers of this challenge.

schelv commented 7 years ago

We can maybe take a look at the target_size in the flow_from_directory method of the keras ImageDataGenerator. That resizes the image. Maybe we can use it.

schelv commented 7 years ago

Also found this tutorial on using resampling using convolution.