can not repeat your tutorial "ntegrating scATAC-seq data using SCALEX"

jsxlei / SCALEX

Online single-cell data integration through projecting heterogeneous datasets into a common cell-embedding space

BSD 3-Clause "New" or "Revised" License

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can not repeat your tutorial "ntegrating scATAC-seq data using SCALEX" #17

Closed daweibushen closed 1 year ago

daweibushen commented 1 year ago

just as follow file, could you fix it? [Uploading Integrating scATAC-seq data using SCALEX.zip…]()

jsxlei commented 1 year ago

Hi thank you for your interests. Could you provide more details to help fix your issue including the data you use, the SCALEX version, the command and the error or results?

daweibushen commented 1 year ago

Integrating scATAC-seq data using SCALEX.zip

jsxlei commented 1 year ago

You can install the newest version by pip install git+https://github.com/jsxlei/scalex.git or pip install scalex==0.2.0 (the version used in the tutorial) to reproduce the results in the tutorial. Let me know if this solves your issue.