jtamames / SqueezeMeta

A complete pipeline for metagenomic analysis
GNU General Public License v3.0
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Step 1: Megahit Issue #680

Closed Ravi-WSU closed 1 year ago

Ravi-WSU commented 1 year ago

Hello,

I am getting the same error in Megahit as the issue below, would that solution still work; I've attached my Megahit log as well. For changing assembly options, do I need to completely restart my job or can I add it to my script and restart?

log.gz <---- Megahit log

208

Ravi-WSU commented 1 year ago

This is the ending to the Megahit log. Thank you.

image

jtamames commented 1 year ago

Hello Better restart the full project adding the kmer sizes for the assembler, as in #208

Ravi-WSU commented 1 year ago

Thank you for your help Javier, I will try that