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jtamames / SqueezeMeta

A complete pipeline for metagenomic analysis
GNU General Public License v3.0
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Illegal instruction (core dumped) #766

Closed rakeshkrpatra closed 4 months ago

rakeshkrpatra commented 6 months ago

when I run

test_install.pl

result all ok up to -

kmer-db NOT OK      
ERROR: Error running kmer-db -h

I have re-installed kmer-db and runkmer-db -h Illegal instruction (core dumped)

how to fix this ? please help

fpusan commented 6 months ago

Hi! What SqueezeMeta version are you using? Also what is your OS/distribution version? kmer-db is only used for the seqmerge mode, so as long as you use the sequential, merged or coassembly modes you should be fine. You can try installing kmer-db manually as discussed in #669. I see that you posted there too, I will answer your questions about installing it in that thread.

fpusan commented 4 months ago

Closing due to lack of activity, feel free to reopen