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jtamames / SqueezeMeta

A complete pipeline for metagenomic analysis
GNU General Public License v3.0
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SQMTools R upload Issue #781

Closed Whitehouse2610 closed 2 months ago

Whitehouse2610 commented 5 months ago

Hello,

I have run the co-assembly method through a HPC and am now looking to upload the data to R to explore the data. I have downloaded SQMtools version 1.6.3 and first tried to run the Hadza test data provided and I get the following error code:

"Directory "/Hadza" does not seem to contain a valid SqueezeMeta project".

I am unable to determine what this means as I first tried it on my own data outputs, but the issue remained. I am not super familiar with R and may be making a junior mistake.

Any help that could be provided would be useful.

fpusan commented 5 months ago

Hi! Try removing the first backslash

fpusan commented 2 months ago

Closing due to lack of activity, feel free to reopen