Panda-smile
commented
4 months ago Thanks for professor, I just finally solved it
Closed Panda-smile closed 4 months ago
Panda-smile
commented
4 months ago Thanks for professor, I just finally solved it
jtamames
commented
4 months ago Glad to hear!
教授您好，我在添加cazy数据库时遇到问题，不知道如何解决？（将cazy注释到现有项目shotguntrans中），期待您的回复。（微笑~）
CAZyDB.Annotation.txt db.list.txt
运行： /public/home/zhanglj/miniconda3/envs/squeezeMeta/SqueezeMeta/utils/add_database.pl shotguntrans db.list
CazyDB /public/home/zhanglj/squeezemetatrans/Squeezemetacazy /public/home/zhanglj/squeezemetatrans/Squeezemetacazy/CAZyDB.AnnotationError: Invalid parameter count for option '--db' Error running command: /mnt/hpc/home/zhanglj/miniconda3/envs/squeezeMeta/SqueezeMeta/bin/diamond blastp -q /mnt/hpc/home/zhanglj/squeezemetatrans/shotguntrans/results/03.shotguntrans.faa -p 8 -d -e 0.001 --id 30 --quiet -b NF -f 6 qseqid qlen sseqid slen pident length evalue bitscore qstart qend sstart send -o /mnt/hpc/home/zhanglj/squeezemetatrans/shotguntrans/intermediate/04.shotguntrans.CazyDB /public/home/zhanglj/squeezemetatrans/Squeezemetacazy /public/home/zhanglj/squeezemetatrans/Squeezemetacazy/CAZyDB.Annotation.diamond at /public/home/zhanglj/miniconda3/envs/squeezeMeta/SqueezeMeta/utils/add_database.pl line 71, line 0.000000.