fpusan
commented
2 days ago Seems that you didn't download the databases (or you did, but you didn't run configure_nodb.pl after updating SqueezeMeta)
Open AntonioPuriel opened 2 days ago
fpusan
commented
2 days ago Seems that you didn't download the databases (or you did, but you didn't run configure_nodb.pl after updating SqueezeMeta)
Hello, I started to work with my data in a cluster; but when I submit the script it dies immediatly. Thanks in advance for your help :)
SqueezeMeta v1.6.3, September 2023 - (c) J. Tamames, F. Puente-Sánchez CNB-CSIC, Madrid, SPAIN
Please cite: Tamames & Puente-Sanchez, Frontiers in Microbiology 9, 3349 (2019). doi: https://doi.org/10.3389/fmicb.2018.03349
[0mRun started Fri Jun 28 14:16:21 2024 in coassembly mode 4 metagenomes found: HC_T0 Oxico Oscil Anoxi
[31mCan't open conf file /zfs/softs/contrib/apps/anaconda/3/envs/squeezemeta-1.6.3/SqueezeMeta/scripts/SqueezeMeta_conf.pl [0mDied at /softs/contrib/apps/anaconda/3/envs/squeezemeta-1.6.3/bin/SqueezeMeta.pl line 961.
SqueezeMeta.log