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jtamames / SqueezeMeta

A complete pipeline for metagenomic analysis
GNU General Public License v3.0
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For running specific step #862

Closed mingxues2024 closed 3 weeks ago

mingxues2024 commented 3 months ago

Hi, I wanna to know whether there is some code for just running specific step? Such as, only run assembly rather than all steps.

fpusan commented 3 months ago

If you only want to run the assembly you just need to add -step 1 to your SqueezeMeta.pl call

fpusan commented 3 months ago

I apologize, it I would be -test 1, not -step 1