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jtleek / rpackages

R package development - the Leek group way!
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about Rmd and BiocStyle.latex #5

Closed rmflight closed 10 years ago

rmflight commented 10 years ago

In the body, you mention having an Rmd file in inst/doc, and using the BiocStyle latex styles.

If you are going to use Rmd files, you will be producing HTML vignettes, unless you plan to do markdown to latex in the end using some kind of makefile and pandoc. So I am guessing you actually meant to have an Rnw file.

Also, as of the latest version of R, the place to put the vignette source is in packagename/vignettes, and let the build take care of putting them in inst/doc/, or do build_vignettes from the command line.

jtleek commented 10 years ago

Can you correct this with a pull request and add yourself to the list of contributors down at the bottom? It would be good if you added a link to where Bioconductor states the new rules.