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jtlovell / GENESPACE

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Extracting genes used for syntenic blocks #155

Closed caonetto closed 2 months ago

caonetto commented 4 months ago

First of all, thanks for creating this amazing tool! Is there a straight way of extracting the genes involved in each syntenic block for the two species being compared?

Thanks!

jtlovell commented 2 months ago

Yes! Check out the synHits text files. These have a column 'blkID' that you can parse.