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jts / nanocorrect

Experimental pipeline for correcting nanopore reads
MIT License
39 stars 10 forks source link

Add .DELETE_ON_ERROR #10

Closed sjackman closed 9 years ago

sjackman commented 9 years ago

After continuing after a failed run, I got the error:

+ make -f full-pipeline.make CORES=12 polished_genome.fasta
make -f nanocorrect/nanocorrect-overlap.make INPUT=raw.reads.fasta NAME=raw.reads
make[1]: Entering directory '/projects/btl/sjackman/nanopore-paper-analysis'
fasta2DB raw.reads raw.reads.pp.fasta
Skipping 'raw.reads.pp', file is empty!