Hi
When I run nanocorrect-overlap.make I get the following error
perl ~/nanocorrect/nanocorrect-preprocess.pl ../Test_Npore_ReadsPass.2D.fasta > Test_2D.pp.fasta
~/bin/fasta2DB Test_2D Test_2D.pp.fasta
~/bin/DBsplit -s50 Test_2D
~/bin/DBdust Test_2D
HPCdaligner -t5 -mdust Test_2D > HPCcommands.txt
HPCdaligner: -m is an illegal option
make: *\ [HPCcommands.txt] Error 1
When I check the Usage for HPCdaligner I do not see and -m flag
Hi When I run nanocorrect-overlap.make I get the following error perl ~/nanocorrect/nanocorrect-preprocess.pl ../Test_Npore_ReadsPass.2D.fasta > Test_2D.pp.fasta ~/bin/fasta2DB Test_2D Test_2D.pp.fasta ~/bin/DBsplit -s50 Test_2D ~/bin/DBdust Test_2D HPCdaligner -t5 -mdust Test_2D > HPCcommands.txt HPCdaligner: -m is an illegal option make: *\ [HPCcommands.txt] Error 1
When I check the Usage for HPCdaligner I do not see and -m flag
Usage: HPCdaligner [-vbdAI] [-k<int(14)>] [-w<int(6)>] [-h<int(35)>] [-t] [-H]
[-e<double(.70)] [-l<int(1000)>] [-s<int(100)] [-M]
[-dal<int(4)>] [-mrg<int(25)>]
path:db|dam [block:int[-range:int]
Is this a version issue