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jts / nanopolish

Signal-level algorithms for MinION data
MIT License
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Nanopolish Eventalign #1097

Open gsukrit opened 11 months ago

gsukrit commented 11 months ago

Hi,

I would like to know if the command nanopolish eventalign changes the file size/content of the sequencing_summary file we specify in the command. If so, why? Since we are not writing the output in the sequencing_summary file.

The command used by me was: nanopolish eventalign --reads --bam --genome --scale-events --signal-index --summary --threads 50 >

After I ran this command, the size of the sequencing_summary file also changed. I need some clarity on this.

Thanks,

Sukriti

Dongxu-Zheng commented 10 months ago

Hi, I also overwrote my summary file. I think you can check this reply: https://github.com/jts/nanopolish/issues/940#issuecomment-927891281