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jts / nanopolish

Signal-level algorithms for MinION data
MIT License
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duplex and nanopolish still make sense after assembly ? #1110

Open DelphIONe opened 9 months ago

DelphIONe commented 9 months ago

I wonder if the use of Nanopolish after a canu assembly processed on duplex reads is still of interest in your opinion? If yes, is it possible ?

Thanks Jared for your answer and your work in this tool :-)

jts commented 9 months ago

I don't think it is worth it, I would try medaka instead.

Jared