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jts / ncov-tools

Small collection of tools for performing quality control on coronavirus sequencing data and genomes
MIT License
47 stars 16 forks source link

Add qc to snakemake #3

Closed rdeborja closed 4 years ago

rdeborja commented 4 years ago

Added the QC summary metrics file generation to the main pipeline. Requires the use of ncov_parser which has been included in the environment.yml file.