jts / ncov-tools

Small collection of tools for performing quality control on coronavirus sequencing data and genomes
MIT License
47 stars 16 forks source link

Create alleles from vcf #89

Closed rdeborja closed 3 years ago

rdeborja commented 3 years ago

Added an alleles_vcf.tsv file which constructs the alleles file based on the VCF mutations across all samples. The mixture report has been updated to use the alleles_vcf.tsv file for the mixture_report.tsv.