jts / sga

de novo sequence assembler using string graphs

http://genome.cshlp.org/content/22/3/549

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bad shebang in python scripts #1

Closed jstjohn closed 13 years ago

jstjohn commented 13 years ago

I need to use a python version that is not /usr/bin/python to get ruffus to work.

You could change the shebang at the top of the sga-pipeline python script from:

!/usr/bin/python

to:

!/usr/bin/env python

so that the python version that is used is chosen from the user's environment.

Thanks!

jstjohn commented 13 years ago

I did not mean for the huge bold text. I started the line with a '#' character and thats what happened. Didn't mean for the post to look rude.

jts commented 13 years ago

Thanks for reporting this and suggesting a fix. I have applied the changes and pushed a new version. if you update to 4e225d32bb3824d349a1 you'll have the fix.