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jts / sga

de novo sequence assembler using string graphs
http://genome.cshlp.org/content/22/3/549
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Missing scripts in bin directory #116

Open jsmedmar opened 8 years ago

jsmedmar commented 8 years ago

I installed SGA following these steps:

wget https://github.com/jts/sga/archive/v0.10.14.tar.gz
./autogen.sh
./configure   --with-sparsehash=/path/to/sparsehash/2.0.3 \
              --with-bamtools=/path/to/bamtools/2.4.0 \
              --prefix=/path/to/sga/0.10.14
make && make install

However:

$ ls /path/to/sga/0.10.14/bin
sga  sga-astat.py  sga-bam2de.pl  sga-mergeDriver.pl

Why am I missing these scripts?

bin/sga-align        bin/sga-astat.py   bin/sga-beetl-index.pl    bin/sga-deinterleave.pl  bin/sga-joinedpe        bin/sga-popcat.pl        bin/sga-rename.pl
bin/sga-asqg2dot.pl  bin/sga-bam2de.pl  bin/sga-call-variants.pl  bin/sga-diffCalls.pl     bin/sga-mergeDriver.pl  bin/sga-preqc-report.py  bin/sga-vcf-dedup.pl

Wondering If I missed some installation step.