jts / sga

de novo sequence assembler using string graphs
http://genome.cshlp.org/content/22/3/549
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CFFLAGS & CXXFAGS #137

Open nottwy opened 7 years ago

nottwy commented 7 years ago

In your Makefile, it is:

CFLAGS = -std=gnu99 -O3
CXXFLAGS = -std=c++98 -O3

I have to change them into:

CFLAGS = -std=gnu++11 -O3
CXXFLAGS = -std=c++11 -O3

Then I can compile parts of your code.

But I can't step through the compiling stage of SGA.

There are lost of error information with "Undefine" in it. I get your code with git clone -b master --recursive https://xxxx.git.