jts / sga

de novo sequence assembler using string graphs
http://genome.cshlp.org/content/22/3/549
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sga-astat module not found #153

Open pnatsi opened 5 years ago

pnatsi commented 5 years ago

Hello,

I am trying to run the sga pipeline, and I can't make the sga-astat work. The error that I get is:

Traceback (most recent call last): File "/usr/bin/sga-astat", line 6, in import pysam File "/usr/lib/python2.7/dist-packages/pysam/init.py", line 5, in from pysam.libchtslib import * ImportError: No module named libchtslib

I tried re-installing pysam many times, but couldn't fix it. Any suggestions?